Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq78 125 2e-23 seq14 93.3 1e-13 >seq78 Length=184271 Score = 125 bits (138), Expect = 2e-23 Identities = 217/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTG 363448 |||||||| ||||| | ||| || ||||| |||| | ||||||||| | ||| | Sbjct 134452 TTTCGGATTCAAGACTCTCGAGCGGTCGTACCT-TCTCAGGATCAATGGTCGTGTTGCCG 134394 Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508 |||| || || |||||| | |||||||||||| | || ||||| ||| |||| Sbjct 134393 AACGTCCCCAACATATGATCATGCGTGTTGCTGTGGGCATCCACAAGAACGATATTGAGA 134334 Query 363509 CCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 || || || ||||| || ||| | || || | ||||| ||||| | ||||| Sbjct 134333 GCGTCATCGAGACATACAACCTTATGTCTGAACGATTCTTCACACACGCGTCACCAACTC 134274 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||||||||| |||| | ||||||| | || ||||| | | ||||| | Sbjct 134273 TGTTCAATGCTGGCACTCCTCATCCACAACTAAGCTCATGCTTCTTGGTGTGCATGAAAG 134214 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || ||||| |||||||||| ||||| ||||||| ||| || | || ||||| | Sbjct 134213 ATGACTCCATAGAGGGTATCTACGACACCCTTAAGACTTGCGCCATGATCAGCAAGACCG 134154 Query 363689 CAGGCGGAATTGG 363701 | || ||||| || Sbjct 134153 CTGGTGGAATCGG 134141 Score = 98.7 bits (108), Expect = 3e-15 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 364402 AATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCT 364460 ||||| ||||| |||| || || || | ||| || |||||||||||||| |||||||| Sbjct 133288 AATTACTATCCCGTTCCGGAGGCTCGCAC-TTCCAACATGCGTCATCGCCCCATTGGTCT 133230 Query 364461 TGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGA 364520 |||||| ||||| ||||| || | ||||||||| ||| || ||||||| || ||||| Sbjct 133229 TGGTGTCCAGGGTCTCGCAGATGCTTTTATGATTCTCCGTTTGCCATTTGACTCACCTGA 133170 Query 364521 CGC 364523 || Sbjct 133169 GGC 133167 Score = 87.8 bits (96), Expect = 5e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||||| || ||| || ||||| || || | |||||||||||||||| || ||| Sbjct 134050 TACATTGCTGGAACAAACGGCTACTCTAACGGTATTGTTCCCATGCTTCGTGCGTATGAT 133991 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 || || | || ||||| || ||||| ||||| || || ||||| || || Sbjct 133990 GCCACAGCACGCTATGTCGATCAAGGTGGCAACAAGCGACCGGGAGCTTTTGCGATTTAC 133931 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915 || || || || | || || ||||| || || || || ||||||| || ||| Sbjct 133930 CTTGAACCATGGCACCCTGACATATTTGATTTCCTCGACCTGAGGAAAAATCATGGTAAA 133871 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||||| | || || |||||| ||||||| || || ||| ||| |||| Sbjct 133870 GAGGAGTCACGGGCGCGTGATTTGTTCTACGCGCTGTGGATTTGTGAC 133823 >seq14 Length=427353 Score = 93.3 bits (102), Expect = 1e-13 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTC---ATTCGCGGAACGTCTT 22497 ||||| || ||||| || || ||||| || | ||||| ||| | || || | Sbjct 81861 AAGGCTGACTGGGCACTCAAGTGGATATCTGATCAGCGTTCCACATTTGGTGAGCGCTTG 81802 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 | || || |||| || |||||||| ||||| ||||| | ||| | ||||| ||| Sbjct 81801 GTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCCTTTGCGTCTATCTTCTGG 81742 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 | || || |||| | ||||| || || ||||| || || ||| | || ||||| ||| Sbjct 81741 TTGAAGAAGCGTGGTCTGATGCCTGGACTTACGTTCTCCAACGAGCTCATCAGCCGTGAT 81682 Query 22618 GAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 |||||| | || ||||||||||| || |||| Sbjct 81681 GAGGGTATGCACACCGATTTTGCTTGCTTGCT 81650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303327716212100