Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq47 105 6e-18 seq16 95.1 1e-14 seq4 89.7 5e-13 >seq47 Length=240645 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| |||||||| ||||||||||| ||| Sbjct 28211 CCGCCACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAA 28152 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || ||||||||||||||| | || | |||||||| || |||||| Sbjct 28151 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGG 28092 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||| | | || | ||| || | ||||| | Sbjct 28091 ATACCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCACC 28032 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || || || || ||||| ||||||||| Sbjct 28031 TCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 27984 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| |||||| || || |||||||| | Sbjct 28439 CCACCACGAAGACGGAGTACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAC 28380 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| | |||||| || || |||| | |||||||||||| || || Sbjct 28379 AGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGA 28320 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || ||| ||||| | || | || || | ||||| | Sbjct 28319 ATGCCCTCTTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCACC 28260 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || ||||| || || || || ||||| |||||||| Sbjct 28259 TCCAATGTGATTGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 >seq16 Length=421267 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||||| || || || | || |||||||| || ||||||||||| Sbjct 331994 GCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGA 332053 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||| || | |||||| || || |||| | || ||||| || || || Sbjct 332054 AAGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGG 332113 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||||||| ||| | | || | || |||| || || | Sbjct 332114 AATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCAC 332173 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||| ||||| || || || || || |||||||||||| || Sbjct 332174 TTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATGCCT 332225 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | ||| || ||||| ||||| |||||||| Sbjct 332222 GCCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGA 332281 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||| || | |||||| || || |||| | || || ||||| ||||| Sbjct 332282 GAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGG 332341 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 || ||||| ||||| ||| | | ||||| | | || | ||||||| |||||| | Sbjct 332342 AATGCCTTCCTTGTCC-TGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTA 332400 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||| || || || || || || ||||||||||||||| || Sbjct 332401 CTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCATGCCT 332453 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| || | ||| || || | || | ||| ||||||||| ||||| ||||| Sbjct 331765 AGCCACCACGAAGACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAG 331824 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | || || || || | |||||| |||||| |||| | || || ||||| |||| Sbjct 331825 AGAGCGTACGACCATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAG 331884 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCG 131184 | || ||||| ||||| ||| | | ||| || | | || | ||| |||| ||||| Sbjct 331885 GAATGCCTTCCTTGTCC-TGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCC 331943 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 | || | || | ||| || || || || || || || |||||||||||| || Sbjct 331944 ACCTCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCATGCCT 331997 >seq4 Length=631323 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || || |||||||| |||||||| ||||| Sbjct 303747 CCACCACGGAGACGGAGAACCAAGTGAAGCGTGGATTCCTTTTGGATGTTGTAGTCGCTA 303688 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| | |||||||||||| || ||| Sbjct 303687 AGAGTACGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 303628 Query 131128 AT 131129 || Sbjct 303627 AT 303626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472003654752000