Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq7 132 3e-26 seq47 113 3e-20 seq16 111 1e-19 seq1364 104 2e-17 seq569 95.1 8e-15 >seq7 Length=573012 Score = 132 bits (146), Expect = 3e-26 Identities = 220/314 (70%), Gaps = 8/314 (3%) Strand=Plus/Minus Query 6182 TCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCG-CATCTGCGCCAAGGTCG 6240 |||| |||| | ||| ||||||||||||| ||||| | | ||| | | ||| | | Sbjct 441603 TCGTGATGTCGATGACAAGTTCTACCGCTACCGCATGCCCCTTCTTCT-CACAAAGATTG 441545 Query 6241 AGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGC 6300 | || || || || ||||||||||||||| | |||||| | || |||||| || | Sbjct 441544 AAGGCAAAGGCAATGGTATTAAAACCGTCGTCCCTAACATGGCAGATGTCGCTCGTGCCC 441485 Query 6301 TCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGC 6360 | |||||| |||||||||| || |||| ||||| || || || || || ||||| Sbjct 441484 TATCTCGCCCTCCCACCTACCCTACCAAATTCTTCGGCTGTGAGCTCGGAGCACAGACCT 441425 Query 6361 AGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAA---CTCTGCCAAGC 6417 | |||| |||| || ||||||| |||||| ||||| | ||| | |||| | | Sbjct 441424 CTTCTGATGACAAGAATGAGCGCTACATCGTAAACGGCGCTCATGATGCCTCTCGC---C 441368 Query 6418 TGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACC 6477 | ||| | ||||||| ||| || ||| ||||| || ||||| |||| | |||| Sbjct 441367 TCAGGGAACTGCTTGACGTCTTCATCGACAAATTTGTTCTTTGTCGCTCATGCAAGAACC 441308 Query 6478 CGGAGACCGAGCTT 6491 | ||||| || ||| Sbjct 441307 CTGAGACGGATCTT 441294 >seq47 Length=240645 Score = 113 bits (124), Expect = 3e-20 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||| ||||||||||| || ||||||||||| |||| || |||| || || || Sbjct 28415 TGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGC 28356 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 ||||||||||| || || || || || || | || | ||| ||||||||| ||| || Sbjct 28355 TTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTC 28296 Query 38235 TGCTTCACATTCTGGACAGTATCT--CCACTTTCAACTTCTAATGTAATAGTTTTACCCG 38292 ||| || || | || || ||| | || || || || ||||| || || ||||||| Sbjct 28295 GCCTTGACGTTGTCGATGGTGTCTGACGAC--TCCACCTCCAATGTGATTGTCTTACCCG 28238 Query 38293 TCAAGGTTTTCACGAATATCTGCAT 38317 | | ||| || ||||| |||||||| Sbjct 28237 TGAGGGTCTTGACGAAGATCTGCAT 28213 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || || ||| |||||| || || ||||| || || | | |||| |||| || | || Sbjct 27959 TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCGAGCTGC 27900 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || || || || || ||||||||||| | ||| | ||| || |||||| || ||| Sbjct 27899 TTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTT 27840 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 |||||| || | || || || || ||||| || || || || || ||||| Sbjct 27839 GCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTGCCCGTG 27780 Query 38295 AAGGTTTTCACGAATATCTGCATG 38318 | ||| || ||||| ||||||||| Sbjct 27779 AGGGTCTTGACGAAGATCTGCATG 27756 >seq16 Length=421267 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||| |||||||||||||| || || |||||||| | ||| | || || || || Sbjct 331791 TGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGC 331850 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 ||||| || || || ||||||||||| || | || | |||||| |||||| ||| ||| Sbjct 331851 TTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTT 331910 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||||||||| | || ||| || || || || || || || || || ||||| Sbjct 331911 GCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTG 331970 Query 38295 AAGGTTTTCACGAATATCTGCATG 38318 | ||| || || || ||||||||| Sbjct 331971 AGGGTCTTAACAAAAATCTGCATG 331994 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||| ||| ||||| |||||||||||||| || | || |||| || || || Sbjct 332247 TGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTCCAACTGC 332306 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 ||||||||||| || ||||||||||| || | || | |||||| |||||| ||| ||| Sbjct 332307 TTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTT 332366 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||||| || | || ||||| || ||||| || || || || || ||||| Sbjct 332367 GCTTTCACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTG 332426 Query 38295 AAGGTTTTCACGAATATCTGCATG 38318 | ||| || ||||| ||||||||| Sbjct 332427 AGGGTCTTAACGAAAATCTGCATG 332450 >seq1364 Length=1366 Score = 104 bits (114), Expect = 2e-17 Identities = 81/96 (84%), Gaps = 7/96 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1340 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1281 Query 25957 TAATCC--TTTCATGCGCGTCACTAATTAGATGACG 25990 |||||| ||| | ||| |||||||||||| || Sbjct 1280 TAATCCATTTTTTTTTGCGGAACTAATTAGATGGCG 1245 >seq569 Length=8867 Score = 95.1 bits (104), Expect = 8e-15 Identities = 63/70 (90%), Gaps = 5/70 (7%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 236 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 295 Query 25957 TAATCCTTTC 25966 |||||| ||| Sbjct 296 TAATCCATTC 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940872638050