Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq16 120 3e-22 seq47 107 2e-18 >seq16 Length=421267 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | ||||| ||||| || Sbjct 332449 ATGCAGATTTTCGTTAAGACCCTCACGGGGAAGACCATCACGTTGGAAGTAGAGTCCTCC 332390 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| |||| ||||| | ||| ||||| ||||| ||||| |||||||| Sbjct 332389 GATACCATCGACAACGTGAAAGCAAAGATTCAG-GACAAGGAAGGCATTCCTCCTGACCA 332331 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || |||||||| || || || ||||| | ||||| | |||||||| Sbjct 332330 ACAACGCCTCATCTTTGCCGGAAAGCAGTTGGAAGACGGCCGCACACTCTCAGATTACAA 332271 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||| || |||||||| || || | || ||| | || | ||||| Sbjct 332270 TATTCAGAAGGAATCCACCCTTCACCTCGTTCTACGTCTCCGTGGAGG 332223 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | || |||||||| || Sbjct 331993 ATGCAGATTTTTGTTAAGACCCTCACGGGGAAGACCATCACTTTGGAGGTGGAGTCATCC 331934 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| ||||| |||| | ||| ||||| ||||| ||||| |||||||| Sbjct 331933 GACACTATCGACAATGTGAAGGCAAAGATTCAG-GACAAGGAAGGCATTCCTCCTGACCA 331875 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || || || || || || ||||||| ||| || | ||||| || Sbjct 331874 ACAACGCCTGATCTTCGCAGGAAAGCAGTTGGAAGATGGTCGTACGCTCTCTGATTATAA 331815 Query 25178 TATTCAAAAAGA 25189 || ||||| || Sbjct 331814 CATCCAAAAGGA 331803 >seq47 Length=240645 Score = 107 bits (118), Expect = 2e-18 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || ||||| | |||||| | || ||||||||||| Sbjct 28213 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACAATCACATTGGAGGTGGAGTCGTCA 28272 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| | || || | ||| |||||||| || |||||||| || Sbjct 28273 GACACCATCGACAACGTCA---AGGCGAAGATTCAG-GACAAAGAGGGCATTCCACCAGA 28328 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || |||||||| || || || || || | ||||| || ||||| Sbjct 28329 CCAGCAGCGTCTGATCTTTGCCGGAAAGCAGTTGGAGGACGGGCGCACGCTGTCGGATTA 28388 Query 25175 CAATATTCAAAAAGA 25189 |||||| || || || Sbjct 28389 CAATATCCAGAAGGA 28403 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| | ||||||||||| ||| Sbjct 27757 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAAGTGGAGTCATCT 27816 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| ||| ||| ||||| || || ||||| ||||| ||| Sbjct 27817 GACACCATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAA 27876 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || || ||||| || | ||||| | || ||| | ||| ||||| Sbjct 27877 CAACGACTCATCTTCGCTGGCAAGCAGCTCGAAGACGGACGTACTCTTTCCGACTACAAC 27936 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 27937 ATCCAGAAGGAGTCCACACTCCA 27959 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| | || |||||||| ||| Sbjct 27985 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAGGTGGAGTCTTCT 28044 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| |||| || || | ||| ||||| || || || || || || || Sbjct 28045 GACACTATCGACAATGTGAAGGCGAAGATTCA-AGACAAGGAGGGTATCCCTCCCGATCA 28103 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||| || ||||| || | ||||| | ||||| | ||| ||||| Sbjct 28104 GCAGCGCCTCATTTTCGCAGGCAAGCAGCTGGAAGACGGCCGCACCCTTTCCGACTACAA 28163 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || || || || Sbjct 28164 CATTCAGAAGGAGTCTACCCTCCA 28187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433319814163250