Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq16 131 1e-25 seq47 105 6e-18 seq39 93.3 4e-14 >seq16 Length=421267 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | || ||||| || |||| | ||||||||| | || Sbjct 332221 ATGCAGATTTTTGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAAGTGGAATCATCC 332162 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||||| ||||||||||| || ||||| || ||||| Sbjct 332161 GACACCATCGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGCATTCCCCCTGATCAG 332102 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| ||||| ||||| || || ||||| || || ||||| | || ||||||||| Sbjct 332101 CAACGCCTTATCTTTGCTGGAAAGCAGTTGGAAGACGGTCGCACGCTTTCGGATTACAAC 332042 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | || || || ||||| | |||||||| Sbjct 332041 ATCCAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTTCGCGGAGG 331995 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||||||||| || | || || || || ||||| | || ||||| | || Sbjct 331993 ATGCAGATTTTTGTTAAGACCCTCACGGGGAAGACCATCACTTTGGAGGTGGAGTCATCC 331934 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || ||| ||||| |||||||| || ||||| || || ||| Sbjct 331933 GACACTATCGACAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAA 331874 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || || || || ||||| || ||| || || |||| ||||| ||| Sbjct 331873 CAACGCCTGATCTTCGCAGGAAAGCAGTTGGAAGATGGTCGTACGCTCTCTGATTATAAC 331814 Query 22399 ATTCAAAAAGA 22409 || ||||| || Sbjct 331813 ATCCAAAAGGA 331803 >seq47 Length=240645 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| |||| | || ||||| | | Sbjct 27985 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAGGTGGAGTCTTCT 28044 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || |||||||||||||||||||| || |||||||| Sbjct 28045 GACACTATCGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCCGATCAG 28104 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | || || ||||||| | ||||| |||||| Sbjct 28105 CAGCGCCTCATTTTCGCAGGCAAGCAGCTGGAAGACGGCCGCACCCTTTCCGACTACAAC 28164 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || || ||| Sbjct 28165 ATTCAGAAGGAGTCTACC 28182 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| |||| | |||||||| | | Sbjct 27757 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAAGTGGAGTCATCT 27816 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| || || ||||||||||| ||||| || |||||| Sbjct 27817 GACACCATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAA 27876 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || || ||||| ||| | || || || || | ||||| |||||| Sbjct 27877 CAACGACTCATCTTCGCTGGCAAGCAGCTCGAAGACGGACGTACTCTTTCCGACTACAAC 27936 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 27937 ATCCAGAAGGAGTCCAC 27953 >seq39 Length=270505 Score = 93.3 bits (102), Expect = 4e-14 Identities = 115/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||| |||| || | ||||| ||| |||||||||||||| || |||||||| || || Sbjct 5828 CGATTCCGTACACAGTGTCAAATCAAAGATTCAAGACAAGGAAGGAATTCCACCGGACCA 5887 Query 22338 ACAACGTCTTATATTTGCCGGCAAACA-GTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||||| || | || || || ||||| | | || ||| |||||| | || || |||| Sbjct 5888 GCAACGGCTCGTCTTCGCTGG-AAACACGCTTGAAGATGACCGCAAGCTTTCGGACTACA 5946 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431 | |||||||| || || || || |||||| | ||| Sbjct 5947 ATATTCAAAAGGAGTCGACGATTCATTTAATCTTG 5981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419720071075750