Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq598 120 6e-22 seq268 114 3e-20 seq65 114 3e-20 seq40 113 9e-20 seq14 93.3 9e-14 >seq598 Length=7264 Score = 120 bits (132), Expect = 6e-22 Identities = 238/350 (68%), Gaps = 2/350 (1%) Strand=Plus/Plus Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716 |||| || ||| || || || | |||||| || | | |||||||||||||| || Sbjct 555 AGGTTGCGCAGCTTGTAGGCTACATCTCCGAAGTTGCCGCATACCATCACGGTGAAGCGA 614 Query 218717 GTCTGCAGGGTG-CCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAAC 218775 || || | || |||| || | |||| |||||||| || || || || ||| ||||| Sbjct 615 GTTTG-ACTATGACCATCGTGAACTTGGCCCAGGACTACGTTGGTAGCAATAACTTGAAC 673 Query 218776 TTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCT 218835 |||| || ||||| ||||||| ||| | ||| |||||| || || |||||| Sbjct 674 CTGCTCCTGCCCAATGGTCAGTACGGTACGCGTGACCAGGGTGGTAAAGACCATGCTTCG 733 Query 218836 GCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGAT 218895 || | ||||||||||| ||| ||||| || ||| ||| || ||||| | || ||| Sbjct 734 GCTCGTTATATCTTTACCAAGCTGTCGGCCTTGAGCCGCGCTGTCTTCAACCCCGCGGAT 793 Query 218896 GATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTG 218955 | | | | | |||||| |||| || | | |||||| ||||||| || || Sbjct 794 GCTCCCTTGTTGACGTATCTGAAGGAAGACAATGACTGGATTGAACCCGAGTACTACATG 853 Query 218956 CCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGG 219005 |||| ||| ||| | | || || || ||||| | || || || || || Sbjct 854 CCTGTTATCCCGCTCGTCCTTGTGAACGGTGCTGAGGGCATTGGAACCGG 903 >seq268 Length=46992 Score = 114 bits (126), Expect = 3e-20 Identities = 151/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 280173 GTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACC 280232 ||| |||| ||||| ||| |||| |||||||| ||| | || |||| | |||||| | Sbjct 19793 GTCCTTGGTCCCAACGGTTCGGGCAAGTCTACGCTAGTTAAGCTCCTCATTGGCGACATG 19852 Query 280233 CAGGCCACTGAGGGGTCCG---TTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 || ||| |||| | | |||||||| || ||| || || | |||||| ||| Sbjct 19853 GAGCCCAACAAGGGTGGTGAAATCTGGAAGCACCCTAACTTGGTCATCGGTTACGTTGCT 19912 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| ||||||||||| || ||||||| |||| ||||||| | ||||||| | Sbjct 19913 CAGCACGCCTTCCACCACATTGACCACCACCTCGACAAGACTCCTCTCGAATACATGTTG 19972 Query 280350 TGGCGCTATGCAAGTGGGCAGGATCTGGA 280378 ||||| || | ||| ||||| |||| Sbjct 19973 TGGCGTTACCAGACTGGTGAGGATTTGGA 20001 Score = 105 bits (116), Expect = 1e-17 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 279706 TGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATG 279765 |||| ||||| |||||||||||||| || ||| | | ||||| || | || || Sbjct 19323 TGTCTGGTGGATGGAAGATGAAGCTTGCTCTCGCCAGGGCCATGCTTTTCAAGGCTGACA 19382 Query 279766 TCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGT 279825 |||| || ||||||||||| ||||||||| |||| |||||| || ||||| | | Sbjct 19383 TCCTCCTCCTTGATGAGCCTACCAACCACTTGGATGTTGTCAACGTTGCTTGGCTCGAGA 19442 Query 279826 CCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTCC 279885 |||||| ||| ||||||| | ||| |||| ||||| ||||||||| |||||| Sbjct 19443 ACTACCTCGTCAGCCTGAAGACCTGCACCTCCATCATCGTCTCACACGACTCTAGCTTCC 19502 Query 279886 T 279886 | Sbjct 19503 T 19503 Score = 84.2 bits (92), Expect = 4e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 |||||| || ||||| |||| | ||||| || || ||||||| || ||||| | || Sbjct 18967 AGGTGAAGACCTGTGCAACTGCCAGTTCTCCCTTGCCTATGGTGCAAAAATTCTCTTGAA 19026 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | | | |||| | |||||||||| |||| || |||||| |||| || || | Sbjct 19027 CACCGCTACCCTCCGCCTCAAGCGTGGTCACCGTTACGGTCTCTGCGGTAAGAACGGTAC 19086 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || ||| || || ||||| || || | ||||| ||| | || || || || | | Sbjct 19087 AGGGAAGTCAACCCTTATGCGTGCTATCACGAACGGGCAGGTTGAGGGTTTCCCCTCCCC 19146 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGA 279562 |||||| | || | ||||| |||||||||||||| Sbjct 19147 TGATGAGGTCCGCACTTTCTATGTCGAGCACGACATCGA 19185 >seq65 Length=183570 Score = 114 bits (126), Expect = 3e-20 Identities = 237/350 (68%), Gaps = 2/350 (1%) Strand=Plus/Minus Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716 |||| || ||| || ||||| | |||||| || | | |||||||||||||| || Sbjct 90422 AGGTTGCGCAGCTTGTAGGTTACATCTCCGAAGTTGCCGCATACCATCACGGTGAAGCGA 90363 Query 218717 GTCTGCAGGGTG-CCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAAC 218775 || || | || |||| || | |||| |||||||| || || || || ||| ||||| Sbjct 90362 GTTTG-ACTATGACCATCGTGAACTTGGCCCAGGACTACGTTGGTAGCAATAACTTGAAC 90304 Query 218776 TTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCT 218835 |||| || ||||| ||||||| ||| | || |||||| || || |||||| Sbjct 90303 CTGCTCCTGCCCAATGGTCAGTACGGTACGTGTGACCAGGGTGGTAAAGACCATGCTTCG 90244 Query 218836 GCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGAT 218895 || | ||||||||||| || ||||| || ||| ||| || ||||| | || ||| Sbjct 90243 GCTCGTTATATCTTTACCGAGCTGTCGGCCTTGAGCCGCGCTGTCTTCAACCCCGCGGAT 90184 Query 218896 GATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTG 218955 | | | | | |||||| |||| || | | |||||| ||||||| || || Sbjct 90183 GCTCCCTTGTTGACGTATCTGAAGGAAGACAATGACTGGATTGAACCCGAGTACTACATG 90124 Query 218956 CCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGG 219005 |||| ||| ||| | | || || || ||||| | || || || || || Sbjct 90123 CCTGTTATCCCGCTCGTCCTTGTGAACGGTGCTGAGGGCATTGGAACCGG 90074 >seq40 Length=260915 Score = 113 bits (124), Expect = 9e-20 Identities = 142/193 (74%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||| |||| |||| ||||| ||| |||| ||||| || ||| | || |||| | ||||| Sbjct 218384 TTGCTGTCCTTGGTCCCAACGGTTCGGGCAAGTCGACGCTAGTTAAGCTCCTCATTGGCG 218443 Query 280228 AGACCCAGGCCACTGAGGG--GTCCG-TTTGGAAGCATCCCAACATGCGGATGGCTTACG 280284 | | | ||| |||| || | |||||||||| || ||| || || | |||| Sbjct 218444 ACATGGACCCCAACAAGGGTGGTGAGATTTGGAAGCACCCTAACTTGGTCATTGGATACG 218503 Query 280285 TCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACA 280344 | |||||||| |||||||||||||| || ||||||| |||| |||||| | |||||| Sbjct 218504 TTGCTCAGCATGCTTTCCACCACATTGACCACCACCTCGACACAACTCCTCTCAAATACA 218563 Query 280345 TTCAGTGGCGCTA 280357 | | |||||| || Sbjct 218564 TGCTGTGGCGTTA 218576 Score = 104 bits (114), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||| |||| |||| ||||| ||| |||| ||||| || ||| | || |||| | ||||| Sbjct 216358 TTGCTGTCCTTGGTCCCAACGGTTCGGGCAAGTCGACGCTAGTTAAGCTCCTCATTGGCG 216417 Query 280228 AGACCCAGGCCACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACG 280284 | | | ||| |||| || | | |||||||| || ||| || || | |||| Sbjct 216418 ACATGGACCCCAACAAGGGTGGTGAGATCTGGAAGCACCCTAACTTGGTCATCGGATACG 216477 Query 280285 TCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACA 280344 | |||||||| |||||||||||||| | ||||||| |||| |||||| | |||||| Sbjct 216478 TTGCTCAGCATGCTTTCCACCACATTAACCACCACCTCGACACAACTCCTCTCAAATACA 216537 Query 280345 TTCAGTGGCGCTA 280357 | | |||||| || Sbjct 216538 TGCTGTGGCGTTA 216550 >seq14 Length=427353 Score = 93.3 bits (102), Expect = 9e-14 Identities = 113/153 (74%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| |||| || ||||| | ||||||||||| || ||||| ||| Sbjct 81339 TCGAAGAAGTTGGTCTTCCCCTGTAGCGAGATCATGTCCATGAAGTCAAATGGGTTGGTG 81398 Query 251623 GCATTGT-ACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAG 251681 || |||| || |||| | ||| || | || || | ||||||||| || ||||| | Sbjct 81399 GCGTTGTAACACCTTGTCGTTGCCCAGCGACACCAACAAGCGGTCTGCAACGAACTCGAT 81458 Query 251682 ATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 ||||| | ||| || | | |||||||||||| Sbjct 81459 GTACTGGCACATGAGCTTGGCGTTCATGCCAAT 81491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027816387803550