Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq16 104 2e-17 seq47 87.8 2e-12 seq34 82.4 6e-11 >seq16 Length=421267 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || ||||| ||||| ||||| | |||||| |||||| | || || || ||| || Sbjct 331803 TCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGCTTTCCTGCGAAG 331862 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || || |||||||| |||||||||||||| ||||| ||||||| || | | Sbjct 331863 ATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTCACATTG 331922 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||||| || || || |||| || | || || || || || || || ||| Sbjct 331923 TCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTAACA 331982 Query 114372 AAAATCTGCATGGCT 114386 |||||||||||| || Sbjct 331983 AAAATCTGCATGCCT 331997 Score = 102 bits (112), Expect = 7e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | || | || ||||| || ||||| |||||||| Sbjct 332220 ATGCCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCT 332279 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||| | || || || || ||||||| || |||||||| ||| Sbjct 332280 GAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGA 332339 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||||| ||| | | || | ||| |||| ||| || Sbjct 332340 GGAATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCT 332399 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || |||| || | || || || || || || || || |||||||||||| || Sbjct 332400 ACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCATGCCT 332453 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || || | ||| || || || | |||||| || || || ||||||||||| Sbjct 331992 ATGCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCC 332051 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||||| | || || ||||| |||| || || || || || || Sbjct 332052 GAAAGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGG 332111 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| || || || | | || | |||||||| ||||| Sbjct 332112 GGAATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCC 332171 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || |||| || | || || || || || || || ||||||||||||||| || Sbjct 332172 ACTTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATGCCT 332225 >seq47 Length=240645 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | ||| | || | ||||| || || ||||||||||| ||| Sbjct 28214 ATACCGCCACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCG 28155 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||| || || || || ||| | ||||| ||||| || || ||| Sbjct 28154 GAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGA 28095 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| || | | || | ||||| | || || Sbjct 28094 GGGATACCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCC 28035 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | ||| ||||| || || || || || || ||||||||| Sbjct 28034 ACCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 27984 >seq34 Length=318726 Score = 82.4 bits (90), Expect = 6e-11 Identities = 106/143 (74%), Gaps = 5/143 (3%) Strand=Plus/Minus Query 114198 TGAATGTTGTAATCGCTCATAGTACGAGAATCTT-CAAGTTGTTTACCAGCGTAGATGAG 114256 || |||||||| ||||| | |||||| |||| ||| ||| |||||| ||||||| Sbjct 239257 TGGATGTTGTAGTCGCTAAGAGTACGGCTGTCTTGCAAC--GTT--CCAGCGAAGATGAG 239202 Query 114257 ACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAAC 114316 ||||||||||| |||||||||||||| ||||| |||||| || | | || | Sbjct 239201 GCGCTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGAT 239142 Query 114317 GGTGTCGGTGGATTCGACGTCCA 114339 |||||| | ||||| || |||| Sbjct 239141 GGTGTCCGATGATTCCACCTCCA 239119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420126463398600