Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq14 203 6e-47 seq1189 190 4e-43 seq272 143 5e-29 seq22 87.8 3e-12 >seq14 Length=427353 Score = 203 bits (224), Expect = 6e-47 Identities = 324/460 (70%), Gaps = 9/460 (2%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA--GGTTCA 42480 || ||||||||||| || || || ||||| |||||||| ||||| || | | ||| Sbjct 82086 CTCGCCTTCTTCGCTGCATCCGATGGCATTGTCAATGAAAACCT--CCTTGAACGTTTCT 82029 Query 42481 TGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 || ||||| ||| ||| || || ||||||||||||||||| || || |||| Sbjct 82028 CCAATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATCATGATGGAGA 81969 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 || | ||||| ||| ||| | || || |||| |||||| |||| ||| | ||| Sbjct 81968 ACATTCACTCCGAGACCTACTCGCTTCTCATCGACACTTACATCAAGGATTCCGCCCAGC 81909 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | || || | |||||||| || || || ||| ||||| ||||| ||||||| Sbjct 81908 GCGAATACCTCTTTGACGCCATGGAAACTATTCCTTGCGTCAAGCGCAAGGCTGACTGGG 81849 Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 | ||||| ||||| || | || || || ||| | |||| ||||| | | Sbjct 81848 CACTCAAGTGGATATCTGATCAGCGTTCCACATTTGGTGAGCGCTTGGTCGCCTTCGCTG 81789 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAG 42779 ||||||| |||||||||||||| || |||| || || ||||||||| | ||| || | Sbjct 81788 CCGTCGAAGGCATCTTCTTCTCTGGTTCCTTTGCGTCTATCTTCTGGTTGAAGAAGCGTG 81729 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 || | |||||| ||||| || ||||| ||||| ||||||||| | || ||||| |||| Sbjct 81728 GTCT-GATGCCTGGACTTACGTTCTCCAACGAGCTCATCAGCCGTGATGAGGGTATGCAC 81670 Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 | || ||||| || | || ||| |||||||||| || Sbjct 81669 ACCGATTTTGCTTG---CTTGCTCTTTAGCCACCTCAAGC 81633 Score = 111 bits (122), Expect = 3e-19 Identities = 131/177 (74%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762 |||| || |||||| | || |||||||| || ||||| || ||| | || || || || | Sbjct 83940 GGCTAGTTGCCTTTGCTGCAGTCGAGGGTATATTCTTTTCCGGCTCGTTTGCATCAATAT 83999 Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 |||||||||| || | | ||||| || ||||| ||||| || ||||||||||| Sbjct 84000 TCTGGCTCAAAAAGCGTGGATTAATGCCGGGGCTCACTTTCTCCAATGAACTCATCAGTC 84059 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 | ||||||||| |||| | |||||||| || || | ||| | ||| ||||||| Sbjct 84060 GTGACGAGGGGATGCACACCGACTTTGCTTGTCTTTTATTC---ACCCATCTCAGGC 84113 >seq1189 Length=1840 Score = 190 bits (210), Expect = 4e-43 Identities = 329/469 (70%), Gaps = 28/469 (6%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG--TTCA 42480 || ||||||||||| || || || ||||| || ||||| ||||| || || ||| Sbjct 1366 CTCGCCTTCTTCGCTGCATCCGATGGCATTGTAAATGAAAACCT--CCTTGAGCGTTTCT 1423 Query 42481 TGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 | || ||||| ||| ||| || || ||||||||||||||||| || || |||| Sbjct 1424 TCAATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATCATGATGGAGA 1483 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCG 42597 || | ||||| ||| || | ||| |||| |||| |||||| |||| ||| | Sbjct 1484 ACATTCACTCCGAGACCAACTC---ACTTCTCATCGACACTTACATCAAGGATTCCGCC- 1539 Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657 |||| | || || | |||||||| || || || ||| ||||| ||||| |||| Sbjct 1540 AGCGCGAATACCTCTTTGACGCCATGGAAACTATTCCTTGCGTCAAGCGCAAGGCTGACT 1599 Query 42658 GGGCGCTCAACTGG--ATCG----AGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAG 42711 |||| ||||| ||| ||| || || || || ||||| ||| | |||| | Sbjct 1600 GGGCACTCAAGTGGGTATCTGATCAGCGTTCC------ACCTTCGGTGAGCGCTTGGTCG 1653 Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771 |||| | |||||||| |||||||||||||| || | | || |||||||||||||| | Sbjct 1654 CCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCTCTTGCGTCCATCTTCTGGCTGA 1713 Query 42772 AGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 || || ||| | |||||| ||||| || ||||| ||||| ||||||||| | || || Sbjct 1714 AGAAGCGTGGTCT-GATGCCTGGACTTACGTTCTCCAACGAGCTCATCAGCCGTGATGAA 1772 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 || |||| | || ||||| || | || ||| | |||||||| || Sbjct 1773 GGTATGCACATCGATTTTGCTTG---CTTGCTCTTTAACCACCTCAAGC 1818 >seq272 Length=43472 Score = 143 bits (158), Expect = 5e-29 Identities = 280/411 (68%), Gaps = 16/411 (4%) Strand=Plus/Minus Query 42478 TCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAG 42537 |||| || ||||| ||| ||| || || ||||||||||||||||| || || | Sbjct 4073 TCATCAATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATCATGATGG 4014 Query 42538 AGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA--------ACACGTACATCCTGGA 42589 || | | | ||| ||| ||| | ||| |||| |||| |||||| ||| Sbjct 4013 AGGATATTCGCTCCGAGACCTACTC---ACTTCTCATCGACACGACACTTACATCAAGGA 3957 Query 42590 TCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAA 42649 | ||| | |||| | || || | |||||||| | || || ||| ||||| || Sbjct 3956 TTCCGCCCAGCGCGAATACCTCTTTGACGCCATGGAAAGTATTCCTTGCGTCAAGTGCAA 3897 Query 42650 GGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGT 42709 ||| |||||||| ||||| ||||| || | || || || ||| | |||| Sbjct 3896 GGCTGACTGGGCACTCAAGTGGATATCTGATCAGCGTTCCACCTTTGGTGAGCGCTTGGT 3837 Query 42710 AGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT 42769 ||||| | |||||||| |||||||||||||| | | || || |||||||||||||| Sbjct 3836 CGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTAGTTCTTTTGCGTCCATCTTCTGGCT 3777 Query 42770 CAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACG 42828 ||| || ||| | |||||| |||| || ||||| ||||| ||||||||| | || | Sbjct 3776 GAAGAAGTGTGGTCT-GATGCCTGGACCTACGTTCTCCAACGAGCTCATCAGCCGTGATG 3718 Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 | || |||| | || ||||| ||| | || || | |||||||| || Sbjct 3717 AAGGTATGCACATCGATTTTGCTTGCTTGCTCTTTT---ACCACCTCAAGC 3670 >seq22 Length=397055 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/153 (74%), Gaps = 5/153 (3%) Strand=Plus/Plus Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGA 42786 ||||||||||||||| || | || || |||||||||||||| ||| || ||| | || Sbjct 301340 GGGCATCTTCTTCTCTGGTTCTTTTGCGTCCATCTTCTGGCTGAAGAAGCGTGGTCT-GA 301398 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 |||| |||| || ||||| ||||| |||||| || | || || || |||| | || | Sbjct 301399 TGCCTGGACGTACGTTCTCCAACGAGCTCATCGGCCGTGATGAAGGTATGCACATCGATT 301458 Query 42847 TTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 |||| || | || ||| | |||||||| || Sbjct 301459 TTGCTTG---CTTGCTCTTTAACCACCTCAAGC 301488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944320903428000