Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq16 154 3e-32 seq47 147 5e-30 seq60 120 7e-22 seq30 96.9 8e-15 seq101 91.5 3e-13 >seq16 Length=421267 Score = 154 bits (170), Expect = 3e-32 Identities = 174/232 (75%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || ||||| |||| ||| ||| || || ||||| || | Sbjct 332219 CATG-CCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAAT 332277 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | ||| ||||| |||||||| || || ||||| || ||||| || || ||||| | Sbjct 332278 CTGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAG 332337 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || ||||| || ||||| || || ||||||||||| || || | |||| || | Sbjct 332338 GAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACT 332397 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||| | |||||| |||||||| || || ||||| ||||| |||||||| Sbjct 332398 CTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| ||||| || |||||||| ||||| || | | Sbjct 331767 CCACCACGAAGACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAG 331826 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || ||||| || || ||||||||||||||||| || ||||| | || Sbjct 331827 AGCGTACGACCATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGA 331886 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||| || || || ||||| || || |||| ||| || || || Sbjct 331887 ATGCCTTCCTTGTCCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACC 331946 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| |||||||| || || ||||| || || |||||||| Sbjct 331947 TCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCAT 331993 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | |||||||| |||||||| || || ||||| || ||| Sbjct 332031 TCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAG 332090 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || || || ||| | || || ||||| || || ||||||||||| |||||||| Sbjct 332091 ATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTG 332150 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||||| ||||| | |||||| ||||| || || || |||||||| Sbjct 332151 TCGATGGTGTCGGATGATTCCACTTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACA 332210 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 332211 AAAATCTGCAT 332221 >seq47 Length=240645 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288245 GTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGG 288304 ||||||| || || | ||||| || |||| ||||| || || |||||||| || || | Sbjct 28441 GTCCACCACGAAGACGGAGTACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCG 28382 Query 288305 CGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTG 288364 |||||||| ||||| || || || ||||| || |||||||||||||| || || Sbjct 28381 ACAGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTG 28322 Query 288365 GGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTA 288424 | || || ||||| ||||| || ||||| || ||||| || || | || ||| || | Sbjct 28321 GAATGCCCTCTTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCA 28262 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || | ||||| ||||| || || || ||||||||||| |||||||| Sbjct 28261 CCTCCAATGTGATTGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || || ||||||||||| | || || || |||||| Sbjct 27947 TCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCGAGCTGCTTGCCAGCGAAG 27888 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || || |||||| | || || || || || |||||||| || || |||||||| Sbjct 27887 ATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTG 27828 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || ||||| | |||||||||||| || || || ||||||||| Sbjct 27827 TCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACG 27768 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 27767 AAGATCTGCAT 27757 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||| || ||||| |||||||| | || || |||||||| Sbjct 28175 TCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAAA 28116 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| ||| ||||| || || || || || || ||||| ||||| || Sbjct 28115 ATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTCACATTG 28056 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || || | |||||||||||| || || || ||||||||| Sbjct 28055 TCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACG 27996 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 27995 AAGATCTGCAT 27985 >seq60 Length=206367 Score = 120 bits (132), Expect = 7e-22 Identities = 213/309 (69%), Gaps = 14/309 (5%) Strand=Plus/Plus Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475 ||||||||| | ||||| | |||||||| || || | || |||| |||| || Sbjct 28600 CCAAGCGTCCACTTCAGAACTATATGGAAAGGTTGTCGAGACGCCCCAGAGCGAAACAAC 28659 Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 |||||| |||||||| |||||||||||||| || || | || || ||||||||| Sbjct 28660 TCCGTTCTATCCTCGCAGCCCTTACGGTGTCGCCAAACTTTATGCGTATTGGATCACAGT 28719 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595 |||||||||||| | ||| |||||||| || ||| ||| | |||||||| ||||| Sbjct 28720 GAATTACCGTGAGGCATATGGCATGTATGCGTGTAACGGGATCTTGTTCAATCATGAGAG 28779 Query 72596 TCC----CAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATA 72651 || | | |||| || ||||| ||| | || || | | || ||||| ||| Sbjct 28780 CCCGAGGCGAGGGAGGACA----TTCGTTACTAGGAAGATTTCCAGGGCTGTCGCCGATA 28835 Query 72652 TTTTCAATGGTGTCGAAAAA---TGCATGTATCTCGGTAATATAGATGCCAAAAGAGATT 72708 ||| | | | || || || ||||||| ||||| || ||||| | |||| | Sbjct 28836 ---TCAGCGTCGGCAAACAACACTGTTTGTATCTTGGTAACATTGATGCGCAGCGAGACT 28892 Query 72709 GGGGATATG 72717 ||||| ||| Sbjct 28893 GGGGACATG 28901 >seq30 Length=312077 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475 ||| || || | ||||| | |||||||| || |||| || |||| || | || Sbjct 95458 CCAGGCTTCGACCTCAGAACTCTATGGAAAGGTCGTCGAAACCCCACAGAGCGAGACCAC 95517 Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 ||||| || ||||| ||||| || ||||| || ||||||||||| || |||||| Sbjct 95518 GCCGTTCTACCCTCGTAGCCCATATGGTGTCGCCAAGTTGTACGCATACTGGATCACGGT 95577 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595 || ||||| ||| |||| |||||||| |||||| || |||||||||||||| Sbjct 95578 GAACTACCGCGAGGCGTACGGCATGTATGCGTGCAACGGTATCCTATTCAATCACGAGAG 95637 Query 72596 TCC 72598 ||| Sbjct 95638 TCC 95640 >seq101 Length=139910 Score = 91.5 bits (100), Expect = 3e-13 Identities = 144/205 (70%), Gaps = 15/205 (7%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || || || |||||||| || || || || || ||| Sbjct 112889 TCCTTCTGGATGTTGTAGTCGGAAAGAGTACGACCGTCTTCGAACTGCTTGCCAGCAAAG 112830 Query 288343 ATCAGACGCTGTTG--------AGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTT 288394 |||| ||||||||| ||| ||| |||| | ||| | ||||| | ||||| | Sbjct 112829 ATCAAACGCTGTTGGTCAGGGGAGACTCTCGGATGCGTTCGTCGTCCTGAGTCTTCGCCT 112770 Query 288395 TCACGTTTTC--TATAGAA----TCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGG 288448 | ||||| || | | || ||| | || |||| || ||| ||||||| || | Sbjct 112769 TGACGTTGTCGTTGTCGATGATGTCGGAAGGCTCCACTT-GAATGTGCTCGTCTTGCCCG 112711 Query 288449 TCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||||||||| |||||||| Sbjct 112710 TGAGGGTCTTGACGAAGATCTGCAT 112686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179630972800900