Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq60 120 7e-22 seq14 120 7e-22 seq30 96.9 8e-15 >seq60 Length=206367 Score = 120 bits (132), Expect = 7e-22 Identities = 213/309 (69%), Gaps = 14/309 (5%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||||||||| | ||||| | |||||||| || || | || |||| |||| || Sbjct 28600 CCAAGCGTCCACTTCAGAACTATATGGAAAGGTTGTCGAGACGCCCCAGAGCGAAACAAC 28659 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 |||||| |||||||| |||||||||||||| || || | || || ||||||||| Sbjct 28660 TCCGTTCTATCCTCGCAGCCCTTACGGTGTCGCCAAACTTTATGCGTATTGGATCACAGT 28719 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 |||||||||||| | ||| |||||||| || ||| ||| | |||||||| ||||| Sbjct 28720 GAATTACCGTGAGGCATATGGCATGTATGCGTGTAACGGGATCTTGTTCAATCATGAGAG 28779 Query 68585 TCC----CAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATA 68640 || | | |||| || ||||| ||| | || || | | || ||||| ||| Sbjct 28780 CCCGAGGCGAGGGAGGACA----TTCGTTACTAGGAAGATTTCCAGGGCTGTCGCCGATA 28835 Query 68641 TTTTCAATGGTGTCGAAAAA---TGCATGTATCTCGGTAATATAGATGCCAAAAGAGATT 68697 ||| | | | || || || ||||||| ||||| || ||||| | |||| | Sbjct 28836 ---TCAGCGTCGGCAAACAACACTGTTTGTATCTTGGTAACATTGATGCGCAGCGAGACT 28892 Query 68698 GGGGATATG 68706 ||||| ||| Sbjct 28893 GGGGACATG 28901 >seq14 Length=427353 Score = 120 bits (132), Expect = 7e-22 Identities = 130/170 (76%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || |||||||||||| | | |||||| | ||||||||||| ||||| || |||||| | Sbjct 81494 CTCATTGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCAGACCGCTTG 81435 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGT-ACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || | |||| || | || || |||| ||||| ||| ||||| |||| ||| ||||| Sbjct 81434 TTGGTGTCGCTGGGCAACGACAAGGTGTTACAACGCCACCAACCCATTTGACTTCATGGA 81375 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAA--GCGTGTCAG 243728 | || ||||| || ||||| || ||||||||||| || ||||||||| Sbjct 81374 CATGATCTCGCTACAGGGGAAGACCAACTTCTTCGAGAAGCGCGTGTCAG 81325 >seq30 Length=312077 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||| || || | ||||| | |||||||| || |||| || |||| || | || Sbjct 95458 CCAGGCTTCGACCTCAGAACTCTATGGAAAGGTCGTCGAAACCCCACAGAGCGAGACCAC 95517 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 ||||| || ||||| ||||| || ||||| || ||||||||||| || |||||| Sbjct 95518 GCCGTTCTACCCTCGTAGCCCATATGGTGTCGCCAAGTTGTACGCATACTGGATCACGGT 95577 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || ||||| ||| |||| |||||||| |||||| || |||||||||||||| Sbjct 95578 GAACTACCGCGAGGCGTACGGCATGTATGCGTGCAACGGTATCCTATTCAATCACGAGAG 95637 Query 68585 TCC 68587 ||| Sbjct 95638 TCC 95640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102858097492500