Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq47 120 3e-22 seq16 98.7 1e-15 >seq47 Length=240645 Score = 120 bits (132), Expect = 3e-22 Identities = 149/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || ||||||||||| | ||| || ||| |||| || | |||||| || Sbjct 28409 GTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGCTTTCCG 28350 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 42130 || || || || ||||||||||| | ||| | || ||| |||||| ||| | || | || Sbjct 28349 GCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCC-TGAATCTTCGCCTT 28291 Query 42131 GAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 42189 || ||| | | | ||||| ||| ||||| || | ||||| || || ||||| || | Sbjct 28290 GA-CGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTGAGGG 28232 Query 42190 TCTTTACAAAGATTTGCAT 42208 |||| || ||||| ||||| Sbjct 28231 TCTTGACGAAGATCTGCAT 28213 >seq16 Length=421267 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 |||||||||||||| || || ||||||| || || || | || || | |||||| || Sbjct 331797 GTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGCTTTCCT 331856 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 42130 ||||| || || || || ||||| | || | || ||||||||| ||| | |||| || Sbjct 331857 GCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTTGCCTT 331915 Query 42131 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 | | | | |||||| || ||||| || | |||||||| || ||||| || || Sbjct 331916 CACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTGAGGGT 331975 Query 42191 CTTTACAAAGATTTGCAT 42208 ||| ||||| || ||||| Sbjct 331976 CTTAACAAAAATCTGCAT 331993 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| |||||||||||||| | || || || |||| || | |||||| || || || Sbjct 332259 TCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAG 332318 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| || || ||||| | || | || ||||||||| ||| | |||| || ||| Sbjct 332319 ATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTTGCTTTCACGTT 332377 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | || ||| || || || || | ||||||||| || ||||| || ||||| || Sbjct 332378 GTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAAC 332437 Query 42197 AAAGATTTGCAT 42208 || || ||||| Sbjct 332438 GAAAATCTGCAT 332449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543202275252000