Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq47 109 5e-19 seq16 91.5 1e-13 seq39 89.7 5e-13 >seq47 Length=240645 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | || || || || ||||||||||| || | Sbjct 28212 ACCGCCACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGA 28153 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| ||||||| ||||||||||| || ||||||| |||||||| |||||||| Sbjct 28152 AAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGG 28093 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| || || ||| ||| || | || ||| | ||||| Sbjct 28092 GATACCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCAC 28033 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | || || ||||| || ||||| Sbjct 28032 CTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27985 >seq16 Length=421267 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||| || || || || ||||||||||| | | ||||| ||||||| | |||| Sbjct 332019 TGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACCGTCTTCCAACTGC 332078 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| | || || || ||||| || || ||||| ||||| || ||||| ||||| Sbjct 332079 TTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTGTCTTGGATTTTC 332138 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || || | |||||||| | || | |||||| || || Sbjct 332139 GCCTTCACGTTGTCGATGGTGTCGGATGATTCCACTTCCAACGTGATGGTCTTACCCGTG 332198 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || || ||||| ||||| Sbjct 332199 AGGGTCTTGACAAAAATCTGCAT 332221 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 64230 TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGT 64289 |||| || || |||| || ||||| || || ||||||||||| | | ||||| | | Sbjct 332465 TAAG-ACCAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGATAGCGTGCGGCCAT 332523 Query 64290 CTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 ||||||||||||| || || | ||||| || ||||||||||||||||| Sbjct 332524 CTTCAAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGAAT 332572 >seq39 Length=270505 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 64237 TAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAG 64296 || |||||||||||| || |||||||| ||||| || | | |||| | |||||||| Sbjct 5975 TAAATGAATCGTCGACTCCTTTTGAATATTGTAGTCCGAAAGCTTGCGGTCATCTTCAAG 5916 Query 64297 CTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTAT 64356 | || || || | | |||||| |||||||| || ||||||||||| || ||||| || Sbjct 5915 CGTGTTTCCAGCGAAGACGAGCCGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGAAT 5856 Query 64357 TTTT 64360 ||| Sbjct 5855 CTTT 5852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499635119382000