Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq14 116 4e-21 seq47 95.1 1e-14 seq16 91.5 1e-13 >seq14 Length=427353 Score = 116 bits (128), Expect = 4e-21 Identities = 123/160 (77%), Gaps = 3/160 (2%) Strand=Plus/Minus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 ||||||||||| || ||||||| ||||||||||||| || || || || |||||||| Sbjct 81488 GGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCAGACCGCTTGTTGGTG 81429 Query 52731 CAGCTCGGGCAGC--CAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACA 52788 ||| ||||| | ||| || | |||||| ||| || ||||| || ||| ||| | Sbjct 81428 TCGCT-GGGCAACGACAAGGTGTTACAACGCCACCAACCCATTTGACTTCATGGACATGA 81370 Query 52789 TTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 | ||||| |||| ||||||||||| ||||||||||| || Sbjct 81369 TCTCGCTACAGGGGAAGACCAACTTCTTCGAGAAGCGCGT 81330 >seq47 Length=240645 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||| | ||| | || | | |||||||| || |||||||||||| Sbjct 27984 GCCGCCACGAAGACGGAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGA 27925 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||| ||||| || || || | |||| || || ||||| || || || Sbjct 27924 AAGAGTACGTCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGG 27865 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| ||| || | | || | |||||| | |||||||| Sbjct 27864 AATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCAC 27805 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | ||| | ||| || || || || || || || || ||||||||| || Sbjct 27804 TTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGCCT 27753 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || || ||||| || || || ||| |||||| | || || |||| | | Sbjct 28404 CTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAA 28345 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| |||||||| ||||| || || || || |||||||| ||| | || | || | | Sbjct 28344 GATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCC-TGAATCTTCGCCTTGACGT 28286 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 ||| | | |||||| | |||||||||||| | || | || ||||| || || || || Sbjct 28285 TGT-CGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTGAGGGTCTTG 28227 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 28226 ACGAAGATCTGCAT 28213 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | ||| | || | | | |||||||| ||||||||||||||| Sbjct 28211 CCGCCACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAA 28152 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || || || | | || || ||||| || || ||||| Sbjct 28151 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGG 28092 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || |||| || | ||||| | ||||||| Sbjct 28091 ATACCCTCCTTGTC-TTGAATCTTCGCCTTCACATTG-TCGATAGTGTCAGAAGACTCCA 28034 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | ||| | ||| || || || || || || || || ||||||||| Sbjct 28033 CCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 27984 >seq16 Length=421267 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/236 (70%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| | || | | | || ||||| ||||| ||||| || | Sbjct 332222 GCCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC--T 332279 Query 138447 CATAGTACGCGA--GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 | ||| ||| ||| || | || || |||| | |||| || || |||||||| ||| Sbjct 332280 GAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGA 332339 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACT 138562 || || ||||| ||||| ||| | |||| ||| | |||| | | ||| |||| |||| Sbjct 332340 GGAATGCCTTCCTTGTCC-TGAATCTTTGCTTTCACGTTGT-CGATGGTATCGGAGGACT 332397 Query 138563 CCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 | || || | ||| | || || || || || || || || |||||||||||| || Sbjct 332398 CTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCATGCCT 332453 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | |||||| || || || | | |||||||| || |||||||| || Sbjct 331994 GCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGA 332053 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||| || | || || || | | |||| || || || || || || || Sbjct 332054 AAGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGG 332113 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| |||||| || | | || | |||||||| || ||||| Sbjct 332114 AATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCAC 332173 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | ||| | || ||||| || || || || ||||||||||||||| || Sbjct 332174 TTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATGCCT 332225 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 ||||||||| ||||| || || | ||||| || || | || || || | | Sbjct 331802 CTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGCTTTCCTGCGAA 331861 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| || || |||||||| ||||| || ||||| ||||| ||| | |||| || | | Sbjct 331862 GATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTTGCCTTCACAT 331920 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 ||| | | ||||||| ||||||||||| | || | || || || || || || || Sbjct 331921 TGT-CGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTA 331979 Query 138601 ACAAAAATCTGCATGGCT 138618 ||||||||||||||| || Sbjct 331980 ACAAAAATCTGCATGCCT 331997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496252784916000