Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq16 86.0 4e-12 >seq16 Length=421267 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| || || | | || ||| | |||||||| || || || || || |||||||| Sbjct 332221 TGCCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC-- 332278 Query 15008 TGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 ||||| | || ||||||| || || || || || | || | || |||||||| Sbjct 332279 TGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGG 332338 Query 15066 TGGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTT 15124 ||||| ||||||||||| ||| ||||| ||| || | || || |||||| | Sbjct 332339 AGGAATGCCTTCCTTGTCCTGAATCTTTGC-TTTCACGTTGTCGATGGTATCGGAGGACT 332397 Query 15125 CTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || || || ||||| || || || || || || || ||||| ||||| Sbjct 332398 CTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || ||||| ||||| ||||| ||| | | | ||||| || || Sbjct 331791 TGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGC 331850 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 || || ||| | |||| || |||||||| ||||| ||||||||||| ||| ||| Sbjct 331851 TTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTT 331910 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || || ||| | || ||||| ||| || || || || || ||||| || || || Sbjct 331911 GC-CTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGT 331969 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| ||||| Sbjct 331970 GAGGGTCTTAACAAAAATCTGCAT 331993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357385248641750