Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq16 123 2e-23 seq47 96.9 3e-15 >seq16 Length=421267 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | ||||| ||||| || | ||||||||| || || || |||||||| Sbjct 331995 CCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAA 332054 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||||| || || | ||| |||||||| |||| | || |||||||| || || Sbjct 332055 AGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGA 332114 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| |||||||| ||||||| ||| | ||||| ||| |||||| | || || Sbjct 332115 ATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGT-CGATGGTGTCGGATGATTCCAC 332173 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 ||| | || | || || || || || || || ||||||||||||||| || Sbjct 332174 TTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATGCCT 332225 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| ||||| || || ||||| | ||| ||| ||| || | ||| ||||| ||| | Sbjct 331802 CTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGCTTTCCTGCGAA 331861 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTT 127040 ||||| || || || || ||||| ||||| ||||||||| ||| | | ||| || | | Sbjct 331862 GATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTTGCCTTCACAT 331920 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 |||| ||||| | ||| || || | || | || || || || || || || | Sbjct 331921 TGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTAA 331980 Query 127101 CAAAAATCTGCATGGCT 127117 |||||||||||||| || Sbjct 331981 CAAAAATCTGCATGCCT 331997 >seq47 Length=240645 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | || || || || ||||| || ||| Sbjct 27953 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCGAGCTGCTTGCCA 27894 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||| || ||||| || || ||||||||||||||| ||| || ||| Sbjct 27893 GCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTC 27834 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | ||| ||||| | || | ||| ||||| || || || Sbjct 27833 ACGTTG-TCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTGCCCGTGAGGGT 27775 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 27774 CTTGACGAAGATCTGCATGCCT 27753 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||| ||||| ||| | ||||| || || ||||| || || Sbjct 28181 GTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCT 28122 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | ||||||||||||||||| || ||||||||||| || ||| ||| Sbjct 28121 GCGAAAATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTC 28062 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | | ||| || || | || | ||| ||||| || || || Sbjct 28061 ACATTGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGTGAGGGTC 28002 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 28001 TTGACGAAGATCTGCATG 27984 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || ||||||||||| || |||||| || || | ||| ||||| || | Sbjct 28404 CTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAA 28345 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||||| |||||||| || || || |||||||| |||||| || ||| ||||| ||| Sbjct 28344 GATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTCGCCTTGACGTT 28285 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| |||||| | ||| || || | || | || || || || || || || | Sbjct 28284 G-TCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTGAGGGTCTTGA 28226 Query 127101 CAAAAATCTGCAT 127113 | || |||||||| Sbjct 28225 CGAAGATCTGCAT 28213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475491587172000