Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq47 89.7 4e-13 >seq47 Length=240645 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| ||||| | || | ||||| || || || ||||| ||||| | | Sbjct 28439 CCACCACGAAGACGGAGTACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAC 28380 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| | || ||||| || || ||| |||| || | ||||||||| || | || Sbjct 28379 AGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGA 28320 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCAC 39671 | ||| |||||||| || || || | ||| | | | ||||||| ||||| Sbjct 28319 ATGCCCTCTTTGTCCTGAATCTTCGCCTTGA-CGTTGTCGATGGTGTCTGACGACTCCAC 28261 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || ||||| |||||||| | || || |||||||||||||| Sbjct 28260 CTCCAATGTGATTGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347363037971150