Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq16 93.3 2e-13 seq8 87.8 7e-12 >seq16 Length=421267 Score = 93.3 bits (102), Expect = 2e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || || || || || || || ||| | || || || ||||| Sbjct 331993 ATGCAGATTTTTGTTAAGACCCTCACGGGGAAGACCATCACTTTGGAGGTGGAGTCATCC 331934 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||| ||||| || |||||||| ||||||||||| ||| Sbjct 331933 GACACTATCGACAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAA 331874 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || ||| |||| || || | |||||||| | || | | |||||||| Sbjct 331873 CAACGCCTGATCTTCGCAGGAAAGCAGTTGGAAGATGGTCGTACGCTCTCTGATTATAAC 331814 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| || |||||| Sbjct 331813 ATCCAAAAGGAGAGCACCCTTCAC 331790 Score = 93.3 bits (102), Expect = 2e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || || || || || || || || | || || || || || Sbjct 332449 ATGCAGATTTTCGTTAAGACCCTCACGGGGAAGACCATCACGTTGGAAGTAGAGTCCTCC 332390 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | ||| ||| ||||| || |||||||| ||||||||||| ||| Sbjct 332389 GATACCATCGACAACGTGAAAGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAA 332330 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || || | || || || | ||||| || | || | | ||||| ||| Sbjct 332329 CAACGCCTCATCTTTGCCGGAAAGCAGTTGGAAGACGGCCGCACACTCTCAGATTACAAT 332270 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| | || |||||| Sbjct 332269 ATTCAGAAGGAATCCACCCTTCAC 332246 >seq8 Length=540487 Score = 87.8 bits (96), Expect = 7e-12 Identities = 184/272 (68%), Gaps = 3/272 (1%) Strand=Plus/Minus Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || ||||| || ||||| || | ||||| ||||| |||||||| ||| || ||| Sbjct 186789 GTCCCCGCCTACTTCAACGACTCGCAACGTTTGGCAACCAAAGATGCTGGAACGATCGCT 186730 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || | | ||||| || || ||||| |||||||| || ||||| | || || || | Sbjct 186729 GGCCTTGACGTTCTCCGTATCATTAACGAACCTACTGCCGCTGCCATTGCGTACGGTTT- 186671 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||| |||| ||| | ||||||||| |||| | || ||| |||||||||||||| Sbjct 186670 GGATCGTCAATCAAAA--GCAGAAAAAAACGTTTTGATTTTCGATCTTGGTGGAGGAACT 186613 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 ||| || | || || | ||| || || | ||| ||||| ||| ||| Sbjct 186612 TTCGATGTCTCATTGCTCAACATCAGCGGTGGTGTCTTCGCAGTTAAGGCCACCGCAGGT 186553 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||||| | || ||||| ||| | || || Sbjct 186552 GACACTCACTTGGGTGGTGAGGATTTCGACAA 186521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975679163467400