Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq8 246 4e-60 seq23 183 4e-41 seq30 104 3e-17 seq110 100 4e-16 seq66 84.2 3e-11 >seq8 Length=540487 Score = 246 bits (272), Expect = 4e-60 Identities = 554/847 (65%), Gaps = 48/847 (6%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 ||||| || || || | || |||||||| || ||||| || ||||| || | || || Sbjct 295605 ATGGCAGCCTGAACGGCAGCACCGTATGCAACGGCCTCGTCAGGGTTGATGCTCTTGTTG 295664 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | || || | | || ||| ||||| || || || Sbjct 295665 GGCTCCTTGCCGTTGAAGAAGTCAGAAACGAGTTTGACAATACGGGGGATACGCGTGGAA 295724 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 || ||||| | |||||||||| || || | || |||||||| ||||| || || Sbjct 295725 CCGCCGACAAGGACGATTTCATGAACGTTAGCCTTGTCGATCTTGGAGTCCCGGAGGACC 295784 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || |||||||| || | | ||||||| |||| ||||| ||||| ||||| ||| Sbjct 295785 TTCTCGACAGGCTCGAGTGTGCTGCGGAACAGGTCCGCGCACAGCTCCTCGAAACGGGCA 295844 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || || | ||| || ||||| || | ||| || | | || ||||| || |||| || Sbjct 295845 CGAGTGAGGGAAGTGTAGAAGTCGATGCCCTCAAAGAGGGAGTCAATCTCGATGGAAGTC 295904 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || | | || || | || ||||| || ||||| || || || |||| |||||| || Sbjct 295905 TGGGTTGCTGACGAAAGGGTACGCTTGGCACGCTCGCAAGCAGTCCGTAGACGACGGAGA 295964 Query 7382 GCACGCGGGTTACCGGAAATATCT------------------------------------ 7405 ||||| |||||| ||| | |||| Sbjct 295965 GCACGAGGGTTAGAGGAGAGATCTATTACGTTGTCAGCAGCCGAATTGATAAATAAGAAA 296024 Query 7406 ------------TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTC 7453 ||||| || || || || || |||| | ||||| | ||| | Sbjct 296025 AATTACTTACCCTTCTTGTGCTTGCGCTTGAATTCTTGCGCAAAGTGGTTGACGAGACGG 296084 Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513 ||||| || |||||||||||||| || || || || || || || || || |||||| Sbjct 296085 TTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGCCTTCACCTCGAAGATA 296144 Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 || | || || | |||| || |||||||| || || || || || || |||||||| Sbjct 296145 CCCTCCTCGATAGTCAACAGGGACACATCAAAGGTTCCTCCTCCAAGATCGAAAATGAGG 296204 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||||| || || | ||||| ||||||||||| ||||| || || || || || Sbjct 296205 ACGTTACGCTCACCGACAACTTTCTTGTCGAGACCGTAGGCGATGGCAGCAGCAGTGGGC 296264 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || ||||| ||| |||| || | |||||| | || |||||||| || ||| Sbjct 296265 TCGTTGATTATACGGAGAACATTCATTCCGGAAATAGTACCGGCGTCTTTCGTAGCCTGT 296324 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 | || |||||||| |||||||| ||||| || ||||| ||||| |||| || | || Sbjct 296325 CTCTGAGAATCGTTGAAGTAGGCAGGGACAGTGACGACAGCGTCGTTGACATTGTAGCCC 296384 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 | || || || || | || ||||| || |||||||| || || || ||||| | Sbjct 296385 AAGTAAGACTCGGCAGTCTCCTTCATCTTAAGGAGAACCATTGACGAGATTTCTTCGGGA 296444 Query 7814 GCAAACT 7820 | ||||| Sbjct 296445 GAAAACT 296451 Score = 158 bits (174), Expect = 2e-33 Identities = 267/385 (69%), Gaps = 4/385 (1%) Strand=Plus/Plus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || ||| | || | || ||||| |||| | || Sbjct 186407 GTGCGCTTGGCACGCTCGCAAGCGCTTCTGAGTCGTCTGAGTGCACGGGGGTCCTCAGAG 186466 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT--CGAAGGAGTCTCGAAT 7457 ||||| | ||| || | || ||||| | |||||| | || | || | | | Sbjct 186467 ATATCGTGCTTCGTCTTCCTCTTGAACTCATTCTTGAAGTGATCCAAAAGGGTGTTG--T 186524 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 ||||||| |||||||||||||| || || || ||||| || || ||| | |||| ||| | Sbjct 186525 CGAAATCCTCACCACCCAAGTGAGTGTCACCTGCGGTGGCCTTAACTGCGAAGACACCAC 186584 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||||| | ||| || ||||| || || || ||||| || || ||||| | |||| Sbjct 186585 CGCTGATGTTGAGCAATGAGACATCGAAAGTTCCTCCACCAAGATCGAAAATCAAAACGT 186644 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | | || | | | | ||| | ||||||||| || || || || || ||||| | Sbjct 186645 TTTTTTCTGCTTTTGATTGACGATCCAAACCGTACGCAATGGCAGCGGCAGTAGGTTCGT 186704 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 |||| ||||| ||| || |||||||| || ||| | |||||||| || || |||| Sbjct 186705 TAATGATACGGAGAACGTCAAGGCCAGCGATCGTTCCAGCATCTTTGGTTGCCAAACGTT 186764 Query 7698 GCGAATCGTTAAAGTAGGCCGGGAC 7722 |||| ||||| |||||||| ||||| Sbjct 186765 GCGAGTCGTTGAAGTAGGCGGGGAC 186789 Score = 89.7 bits (98), Expect = 7e-13 Identities = 117/161 (73%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 7958 AAAACT---GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGA 8014 |||||| ||||| | ||||||||||| ||||||||| || || || || || | Sbjct 296636 AAAACTTACGTGTTGTGAGGGTTCATGGCGACTTGGTTCTTGGCAGCATCACCAATTAAC 296695 Query 8015 CGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTC 8074 ||||| || || | ||||| ||| || || ||||| || || || || |||||||| Sbjct 296696 CGTTC---GTTGTCGGAAAACGAGACATATGAGGGGGTGGTACGGTTACCCTGGTCGTTA 296752 Query 8075 GCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || || || || || |||||||| || ||||| || Sbjct 296753 GCGATGATCTCAACACGATCATTTTGCCAAACACCGACACA 296793 >seq23 Length=383771 Score = 183 bits (202), Expect = 4e-41 Identities = 259/364 (71%), Gaps = 0/364 (0%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || || || | || |||||||| Sbjct 245420 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGCCTTCGCCTCGAAGATACCC 245361 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | |||| || |||||||| || || || || || || |||||||| ||| Sbjct 245360 TCCTCGATAGTCAACAGGGACACATCAAAGGTTCCTCCTCCAAGATCGAAAATGAGGACG 245301 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || || | ||||| ||||||||||| ||||| || || || | || || Sbjct 245300 TTACGCTCACCGACAACTTTCTTGTCGAGACCGTAGGCGATGGCAGCAGCACTGGGCTCG 245241 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 ||||| ||||| ||| |||| || | |||||| | || |||||||| || ||| Sbjct 245240 TTAATTATACGGAGAACATTCATTCCGGAAATAGTACCAGCGTCTTTCGTAGCCTGTATC 245181 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || ||||| ||||| |||| || | || | Sbjct 245180 TGAGAATCGTTGAAGTAGGCAGGGACAGTGACGACAGCGTCGTTGACATTGTAGCCCAAG 245121 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || ||||| || | || ||||| || ||||||| || || || ||||| | | | Sbjct 245120 TAAGATTCGGCAGTCTCCTTCATCTTAAGGAGAACCACTGACGAGATTTCTTCGGGAGAA 245061 Query 7817 AACT 7820 |||| Sbjct 245060 AACT 245057 Score = 93.3 bits (102), Expect = 5e-14 Identities = 112/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| | ||||||||||| ||||||||| || || || || || | ||||| Sbjct 244863 GTGTTGTGAGGGTTCATGGCGACTTGGTTCTTGGCAGCATCACCAATTAACCGTTC---G 244807 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 || || | ||||| ||| || || ||||| || || || || |||||||| || || || Sbjct 244806 TTGTCGGAAAACGAGACATATGAGGGGGTGGTACGGTTACCCTGGTCGTTAGCGATGATC 244747 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || || |||||||| || |||||||| Sbjct 244746 TCAACACGATCATTTTGCCAAACACCGACGCA 244715 >seq30 Length=312077 Score = 104 bits (114), Expect = 3e-17 Identities = 207/307 (67%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || ||||| || || ||||| ||||| || || || ||||| ||||| | || Sbjct 95453 TTCTACCAGGCTTCGACCTCAGAACTCTATGGAAAGGTCGTCGAAACCCCACAGAGCGAG 95512 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 | || ||||| ||||| ||| |||||||| || || || ||| | ||| ||| Sbjct 95513 ACCACGCCGTTCTACCCTCGTAGCCCATATGGTGTCGCCAAGTTGTACGCATACTGGATC 95572 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || || || || | || | ||||| |||| ||| ||||| ||||| | ||||| ||| Sbjct 95573 ACGGTGAACTACCGCGAGGCGTACGGCATGTATGCGTGCAACGGTATCCTATTCAATCAC 95632 Query 22624 GAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAAT 22683 || ||||| || || | || || || | || || | | || || || Sbjct 95633 GAGAGTCCGAGGCGAGGAAGGACGTTTGTCACGAGGAAGATTTCCAGGGCAGTTGCAGAT 95692 Query 22684 ATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGG 22743 || || | || || || | || || |||||||||||| | |||||| | |||||||| Sbjct 95693 ATTAGCGTCGGCAAGCAGCATTGCTTGTACCTTGGTAACATCGATGCGCAGAGAGATTGG 95752 Query 22744 GGTCATG 22750 ||||||| Sbjct 95753 GGTCATG 95759 >seq110 Length=128585 Score = 100 bits (110), Expect = 4e-16 Identities = 177/256 (69%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | |||||| || || || || || ||||||||||| || Sbjct 66471 TCGAAATCTTCACCACCAAGGTGTGTGTCACCAGCAGTTGCCAAGACTTCAAAGACGCCG 66412 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | ||| |||||||| || || || || || || || | | || || Sbjct 66411 TCGTCGATCGAAAGCAAAGAAACATCGAAAGTTCCTCCTCCAAGATCGTAGACGA-TAAT 66353 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | ||| | ||||| | ||||| || ||||| || || || || || || Sbjct 66352 TT--GAGACTCGCCACCCTTCTTGTTCAGACCATAAGCGATGGCGGCAGCAGTAGGCTCG 66295 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || |||||||| ||| ||| | || |||||||| | ||||| ||||| ||||| || Sbjct 66294 TTGATAATACGGAGAATGTTTAACCCGGCAATAGTACCAGCATCCTTCGTGGCTTGACGC 66235 Query 7697 TGCGAATCGTTAAAGT 7712 || | || || |||| Sbjct 66234 TGGGCGTCATTGAAGT 66219 >seq66 Length=180341 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/117 (77%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 178875 ATATGAAGGTGCAACTGTTCTAGACGCACAGAAAGGCGCCTATTACACACCAATAACAGC 178934 |||||||||||| ||||| | || | |||||||| ||| |||| ||||| || | Sbjct 42867 ATATGAAGGTGCCACTGTCATCGAGCCGAAGAAAGGCTACTACGACACCCCAATTGCAAC 42808 Query 178935 ACTAGATTTCGAAGGTCT--GTATCCATCAATTATGATGGCACATAATTTATGTTAT 178989 || |||||| || ||| |||||| || || ||||||||||||||||| |||||| Sbjct 42807 TCTTGATTTC--AGCTCTTTGTATCCGTCTATCATGATGGCACATAATTTGTGTTAT 42753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635120494302000