Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14 125 9e-24 seq1189 89.7 6e-13 seq272 82.4 9e-11 >seq14 Length=427353 Score = 125 bits (138), Expect = 9e-24 Identities = 353/529 (67%), Gaps = 25/529 (5%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873 ||||||||||| ||| | ||||||||||| || | | || |||| || ||| ||| Sbjct 82176 TGGACTGCTGAGGAGATGGATCTCTCAAAAGACGTCCATGACTGGACGAACCGTCTTAAT 82117 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || || ||| | || | | || |||| || ||||| |||| |||||||| ||| Sbjct 82116 GACAACGAACGCCATTTTGTTTCACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATT 82057 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTG--ATGAGGTGCAATCCTCTGAAGCGAGAT 101991 || ||| || || | | || || || ||||||| || | ||||||| | | Sbjct 82056 GTCAATGAAAACCTCCTTGA--ACGTTTCTCCAATGAGGTCCAGGCTGCTGAAGCCCGGT 81999 Query 101992 CTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 102050 ||||| | | ||| |||| ||| | | | || ||||| ||| ||| Sbjct 81998 GCTTCTACGGCTTCCAAA-TCATGATGGAGAACATTCACTCCGAGACCTACTCGCTTCTC 81940 Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || |||| || || |||||| || || | | |||||||| ||||| |||| Sbjct 81939 ATCGACACTTACATCAAGGATTCCGCCCAGCGCGAATACCTCTTTGACGCCATGGAAACT 81880 Query 102111 GTTCCATGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 102166 |||| || | ||| | ||| | || ||||| | |||||| | |||| || Sbjct 81879 ATTCCTTGCGT-CAAGCGCAAGGCTGACTGGGCACTCAAGTGGATATCTGAT-CA----- 81827 Query 102167 GCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 ||||||| |||| |||||| | |||| || || || || || ||||||||||| Sbjct 81826 GCGTTCCACATTTGGTGAGCGCTTGGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTC 81767 Query 102224 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 102282 ||||||||| |||| |||| | ||| | |||||||| ||||| ||||| || || | Sbjct 81766 TGGTTCCTT-TGCGTCTATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGACTTACGT 81708 Query 102283 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||||||| ||| ||||| ||||| | ||| || ||||| Sbjct 81707 TCTCCAACGAGCTCATCAGCCGTGATGAGGGTATGCACACCGATTTTGC 81659 >seq1189 Length=1840 Score = 89.7 bits (98), Expect = 6e-13 Identities = 346/529 (65%), Gaps = 26/529 (5%) Strand=Plus/Plus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873 ||||||||||| ||| | || |||||||| || | | || |||| || ||| ||| Sbjct 1276 TGGACTGCTGAGGAGATGGAGCTCTCAAAAGACATCCATGACTGGACGAACCGTCTTAAT 1335 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || || ||| | || | | || |||| || ||||| |||| |||||||| ||| Sbjct 1336 GACAACGAACGCCATTTTGTTTCACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATT 1395 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTG--ATGAGGTGCAATCCTCTGAAGCGAGAT 101991 || ||| || || | | | || || ||||||| || | ||||||| | | Sbjct 1396 GTAAATGAAAACCTCCTTGAG--CGTTTCTTCAATGAGGTCCAGGCTGCTGAAGCCCGGT 1453 Query 101992 CTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 102050 ||||| | | ||| |||| ||| | | | || ||||| || ||| Sbjct 1454 GCTTCTACGGCTTCCAAA-TCATGATGGAGAACATTCACTCCGAGACCAACTCACTTCTC 1512 Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || |||| || || |||||| || ||| | |||||||| ||||| |||| Sbjct 1513 ATCGACACTTACATCAAGGATTCCGCCAGCGCGAAT-ACCTCTTTGACGCCATGGAAACT 1571 Query 102111 GTTCCATGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 102166 |||| || | ||| | ||| | || ||||| | |||||| | |||| || Sbjct 1572 ATTCCTTGCGT-CAAGCGCAAGGCTGACTGGGCACTCAAGTGGGTATCTGAT-CA----- 1624 Query 102167 GCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 ||||||| || | |||||| | |||| || || || || || ||||||||||| Sbjct 1625 GCGTTCCACCTTCGGTGAGCGCTTGGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTC 1684 Query 102224 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 102282 |||||| | |||| | || | ||||| |||||||| ||||| ||||| || || | Sbjct 1685 TGGTTCTCT-TGCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGACTTACGT 1743 Query 102283 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||||||| ||| ||||| || || | ||| || ||||| Sbjct 1744 TCTCCAACGAGCTCATCAGCCGTGATGAAGGTATGCACATCGATTTTGC 1792 >seq272 Length=43472 Score = 82.4 bits (90), Expect = 9e-11 Identities = 175/251 (70%), Gaps = 18/251 (7%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAG-CGGATTGGGCTATGAA 102148 |||||||| ||||| ||| |||| || | ||| | ||| | || ||||| | || Sbjct 3937 CTCTTTGACGCCATGGAAAGTATTCCTTGCGT-CAAGTGCAAGGCTGACTGGGCACTCAA 3879 Query 102149 GTGGTT---TGATACAAAGTCGCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTG 102202 |||| | |||| || ||||||| |||| |||||| | |||| || || Sbjct 3878 GTGGATATCTGAT-CA-----GCGTTCCACCTTTGGTGAGCGCTTGGTCGCCTTCGCTGC 3825 Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAG 102261 || || || |||||||||||| |||| || |||| | || | ||||| |||||| | | Sbjct 3824 CGTCGAAGGCATCTTCTTCTCTAGTTCTTT-TGCGTCCATCTTCTGGCTGAAGAAGTGTG 3766 Query 102262 GTCTCATGCCAGGTCTCTGC-TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| ||||| || | || | |||||||||||||| ||| ||||| || || | ||| Sbjct 3765 GTCTGATGCCTGGAC-CTACGTTCTCCAACGAGCTCATCAGCCGTGATGAAGGTATGCAC 3707 Query 102321 CAAGAGTTTGC 102331 || ||||| Sbjct 3706 ATCGATTTTGC 3696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620730373116000