Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1189 95.1 1e-14 seq65 91.5 2e-13 seq272 87.8 2e-12 seq14 84.2 3e-11 >seq1189 Length=1840 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/225 (70%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 |||||||| || ||||||||| || ||| |||||||||||| || || | ||| Sbjct 1774 CCTTCATCACGGCTGATGAGCTCGTTGGAGAACGTAAGTCCAGGCATCAGACCACGCTTC 1715 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| || | ||||| ||||||||||| || || ||||| Sbjct 1714 TTCAGCCAGAAGATGGACGCAAGAGAACCAGAGAAGAAGATGCCTTCGACGGCAGCGAAG 1655 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGTC---GAACCACTTGAGAGCCCAGTT 119689 |||| | |||||| | ||||| | | || || | ||||||||| ||||||| Sbjct 1654 GCGACCAAGCGCTCA-CCGAAGGTGGAACGCTGATCAGATACCCACTTGAGTGCCCAGTC 1596 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 ||||| |||| | ||| || | ||||| ||||| || || || Sbjct 1595 AGCCTTGCGCTTGACGCAAGGAATAGTTTCCATGGCGTCAAAGAG 1551 >seq65 Length=183570 Score = 91.5 bits (100), Expect = 2e-13 Identities = 205/308 (67%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 168283 TCTGTCATGATCATGAGACGACCATAACGAAGTTCGGAAACATCTTTGTACTCCTTTCCT 168342 |||||||||||||| | ||| || || || || | |||| |||||||||| Sbjct 91247 TCTGTCATGATCATCAAACGTCCGTACCGCAGACTGCCGACATTGCTGTACTCCTTGTTG 91306 Query 168343 TGTTGAAGTCCCAAAATTTTCTTGAGATCATTGAACTCCTGATTAGATGTCAACTGTGCC 168402 || || || |||| ||| ||||||| || | || || | || | | ||| | Sbjct 91307 TGCTGGAGACCCATAATCTTCTTGATATTCTGGATTTCTTCGTTCTTCATGATCTGGTCG 91366 Query 168403 ACCGATGAGTCCCTCACGTTTTTACACTTACCACGGAGTGGAAATACCCCATAATGATCT 168462 | | |||| ||||| |||| ||||||||||| || || || ||| || Sbjct 91367 TGCTTCGCTTCCCGGACGTTGAGTAACTTTCCACGGAGTGGGAAGACGCCGAAATTGTCA 91426 Query 168463 CTACCCACGACGGAGAGACCAGCGACAGCGAGAGTTTTCGCTGAATCACCCTCTGTCACG 168522 | ||| || || || || || ||||| | || |||||| || |||||||| || | Sbjct 91427 CGACCAACTACACCCAGTCCGGCCACAGCCAAAGCTTTCGCAGAGTCACCCTCGGTTAAA 91486 Query 168523 ATGAGTGTACACTTTCCAGACTGTGCCGTACCAGCTTTGTTCGCATCGTCCAATTTGGGG 168582 || || |||||| || ||| ||| ||| || || ||||| |||||| | | ||||| Sbjct 91487 ATTAGCGTACACCTTTCAGCGTGTTTCGTGCCTGCGTTGTTTGCATCGGCGAGTTTGGTC 91546 Query 168583 ATACCAGT 168590 || ||||| Sbjct 91547 ATTCCAGT 91554 >seq272 Length=43472 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/228 (70%), Gaps = 11/228 (5%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 |||||||| || ||||||||| || ||| | |||||||||| || || | ||| Sbjct 3714 CCTTCATCACGGCTGATGAGCTCGTTGGAGAACGTAGGTCCAGGCATCAGACCACACTTC 3773 Query 119574 TTTAGCCAAAAGATGG---CACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCG 119630 || ||||| ||||||| || || |||| ||| ||||||||||| || || ||| Sbjct 3774 TTCAGCCAGAAGATGGACGCAAAAGAACT---AGAGAAGAAGATGCCTTCGACGGCAGCG 3830 Query 119631 AAAGCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGTC---GAACCACTTGAGAGCCCA 119686 || |||| | |||||| | |||||| | | || || | ||||||||| ||||| Sbjct 3831 AAGGCGACCAAGCGCTCA-CCAAAGGTGGAACGCTGATCAGATATCCACTTGAGTGCCCA 3889 Query 119687 GTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 || ||||| | || | ||| || | | ||| ||||| || || || Sbjct 3890 GTCAGCCTTGCACTTGACGCAAGGAATACTTTCCATGGCGTCAAAGAG 3937 >seq14 Length=427353 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/227 (69%), Gaps = 9/227 (4%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||| || ||| |||||||||||| || || | ||| Sbjct 81677 CCCTCATCACGGCTGATGAGCTCGTTGGAGAACGTAAGTCCAGGCATCAGACCACGCTTC 81736 Query 119574 TTTAGCCAAAAGAT-GGCACAAA--AACTTCCAGAAAAGAAGATGCCCTCCACACAGGCG 119630 || | ||| ||||| | | |||| || ||||| ||||||||||| || || ||| Sbjct 81737 TTCAACCAGAAGATAGACGCAAAGGAA---CCAGAGAAGAAGATGCCTTCGACGGCAGCG 81793 Query 119631 AAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTC---GAACCACTTGAGAGCCCAG 119687 || |||| | |||||| |||| | | || || | ||||||||| |||||| Sbjct 81794 AAGGCGACCAAGCGCTCACCAAATGTGGAACGCTGATCAGATATCCACTTGAGTGCCCAG 81853 Query 119688 TTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 | ||||| |||| | ||| || | ||||| ||||| || || || Sbjct 81854 TCAGCCTTGCGCTTGACGCAAGGAATAGTTTCCATGGCGTCAAAGAG 81900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588964588590000