Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq47 104 2e-17 seq16 95.1 8e-15 >seq47 Length=240645 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||||| || ||||| || || || ||||| || | || | || |||| ||| Sbjct 28416 GTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTG 28357 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||||||||| || || || ||||||||| | || | ||||| ||||| |||||| Sbjct 28356 CTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTT 28297 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 | |||||| | || | || | ||| || || | || || || || ||||| Sbjct 28296 CGCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGT 28237 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 ||| ||||| || |||||||||||| Sbjct 28236 GAGGGTCTTGACGAAGATCTGCATA 28212 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| |||||| | || | || |||||||| || || || || Sbjct 28175 TCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAAA 28116 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| ||||||| || || || Sbjct 28115 ATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTCAC--AT 28058 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| ||| | ||| || || | || || || || |||||||| ||||| Sbjct 28057 --TGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTT 28000 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 27999 GACGAAGATCTGCAT 27985 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||| | |||| || ||||| ||||| ||||| ||||| | ||| | || || Sbjct 27966 AACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTC 27907 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || |||||||| || || | || | ||||||||||| Sbjct 27906 GAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTG 27847 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || ||| | || | ||| | ||| || || | || || || || Sbjct 27846 GATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTT 27787 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| ||||| || ||||||||||| Sbjct 27786 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 27757 >seq16 Length=421267 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| ||| ||| |||||||| || || || || || | || | || || Sbjct 332240 AACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTC 332299 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| ||||||||||| || || ||||| ||||| | || | || |||||||| Sbjct 332300 CAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTG 332359 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| ||| ||| | || | || || ||| || || | || ||||| || Sbjct 332360 AATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTT 332419 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| ||||| || || |||||||| Sbjct 332420 CCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324627467468400