Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq14 212 7e-50 >seq14 Length=427353 Score = 212 bits (234), Expect = 7e-50 Identities = 369/536 (69%), Gaps = 3/536 (1%) Strand=Plus/Minus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 |||||||| | ||| || | |||||| || || || | || ||||| | ||| | ||| Sbjct 84069 CCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAGCCCCGGCATTAATCCACGCTTT 84010 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || | ||||||||| || ||||| || || |||||||||||||| || ||||| ||||| Sbjct 84009 TTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAATATACCCTCGACTGCAGCAAAG 83950 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCA 19161 |||||||| | || | | || || || | | |||||| | ||||| || Sbjct 83949 GCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGATATCCATCGTAACGCCCAGTCT 83890 Query 19162 GCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCT 19221 || || || || || || |||||||| | || ||| |||||| ||||||| Sbjct 83889 GCTTTTCGCTTGACGGCCGGTATGGTCTCTATGGCATCAAACAGATACTGGCGCTCATTG 83830 Query 19222 GTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATA 19281 || || || || || || | | || | |||| ||| | |||||| || Sbjct 83829 ACGTCCTTGACGAGTGTGTCGATAAGGAGCGAATAGGTCTCTGCATGGACATTTTCAATC 83770 Query 19282 GCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTT 19341 ||||| || || ||||| |||| ||||||| ||||| ||||| | |||| | Sbjct 83769 ATGATCTGGAAACCATAAAAGCATCGAGCTTCTGGGATCTGGACTTCGTTGGAAAAACGC 83710 Query 19342 TCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTA 19401 || |||| |||||| |||||||| |||||| || |||||||| ||||| | |||| Sbjct 83709 TCAACCAGATTTTCGTTAACTATGCCATCAGACGCAGCAAAAAAAGCTAAAATATGTGAG 83650 Query 19402 ATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCATTAATATCTTTAGATAAA 19458 || || || ||||| || |||| | |||||||| | ||| ||| | || | | Sbjct 83649 ATGAAGTGGCGTTCATTTGCAGTTAGTCGGGTATTCCAGTGCACAATGTCTGTCGAGAGA 83590 Query 19459 TCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 || | |||||| | ||||||||||| ||||| ||||| || |||| |||||| || Sbjct 83589 TCCATTTCTTCGGCAGTCCAAAAAGATGCCTCCGCTTTCTTGTACAAGTTCCAGAT 83534 Score = 107 bits (118), Expect = 2e-18 Identities = 366/569 (64%), Gaps = 5/569 (1%) Strand=Plus/Plus Query 18950 TAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAG 19009 |||| | ||| || |||||||| || | ||||| || | || || | || || | Sbjct 81645 TAAAGAGCAAGCAAGCAAAATCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGG 81704 Query 19010 AAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATC 19069 | || || | ||||||||||| || | || || |||||||| ||||| ||||| || | Sbjct 81705 AGAACGTAAGTCCAGGCATCAGACCACGCTTCTTCAACCAGAAGATAGACGCAAAGGAAC 81764 Query 19070 CAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCAT 19129 |||| ||||| || ||||| || || || || || || | | || ||| | | | | Sbjct 81765 CAGAGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCAAATGTGGAAC 81824 Query 19130 CATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCT 19189 | || | ||||| || |||||||| |||||||| || || || || || || | Sbjct 81825 GCTGATCAGATATCCACTTGAGTGCCCAGTCAGCCTTGCGCTTGACGCAAGGAATAGTTT 81884 Query 19190 CTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATA 19249 | || | | ||| || || |||| | | ||| || | || | || || | | Sbjct 81885 CCATGGCGTCAAAGAGGTATTCGCGCTGGGCGGAATCCTTGATGTAAGTGTCGATGAGAA 81944 Query 19250 AACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTG 19309 ||| | || || ||||| || || || || || || ||||| || || | | Sbjct 81945 GCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCACCGGG 82004 Query 19310 CTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCAT 19369 |||| | ||| || ||| | | || | ||| | | |||||||| || || |||| Sbjct 82005 CTTCAGCAGCCTGGACCTCATTGGAGAAACGTTCAAGGAGGTTTTCATTGACAATGCCAT 82064 Query 19370 CACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA-- 19427 | || || || || || | || ||| || |||||| ||| | || |||| Sbjct 82065 CGGATGCAGCGAAGAAGGCGAGGACGTGTGAAACAAAATGGCGTTCGT-TGTCATTAAGA 82123 Query 19428 --TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAA 19485 | |||| |||| | ||||| || | ||| | || ||| | ||||| || || Sbjct 82124 CGGTTCGTCCAGTCATGGACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCAGAATGAT 82183 Query 19486 GCCTCTGCTTTTTTATACATGTTCCATAT 19514 || || ||||| || ||||| | |||||| Sbjct 82184 GCTTCGGCTTTCTTGTACATTTGCCATAT 82212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562097909142000