Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq41 109 4e-18 seq16 96.9 3e-14 seq8 87.8 1e-11 >seq41 Length=273570 Score = 109 bits (120), Expect = 4e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || |||||||| || || || |||||| ||||||| ||||| || || |||||| Sbjct 112163 GCTGTCATCACTGTACCTGCCTACTTCAATGACGCACAACGACAAGCAACGAAGGATGCT 112222 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | || ||||| ||| | || || || | ||||||||||| ||||||||||| ||| Sbjct 112223 GGTCAGATCGCTGGTCTTGAAGTGCTGCGGGTAATCAATGAACCGACTGCTGCTGCTCTT 112282 Query 550520 GCATATGG 550527 || ||||| Sbjct 112283 GCCTATGG 112290 >seq16 Length=421267 Score = 96.9 bits (106), Expect = 3e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || || || |||||||| ||| || |||||||||||| | || || | Sbjct 332231 GAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAGAGTGTGCG 332290 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| | || ||||||||||| || || | ||| || ||||||||||| ||||| Sbjct 332291 GCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTC 332350 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || ||||| ||| ||| || || || ||||| | | || | | ||| | | Sbjct 332351 CTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAG-GACTCTACTTCCAACG 332409 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | || || || || || || ||||||||||| ||||| Sbjct 332410 TGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 >seq8 Length=540487 Score = 87.8 bits (96), Expect = 1e-11 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||||| || ||| |||| || || |||||| | | || ||||| | || ||| | | Sbjct 296449 TTTTCTCCCGAAGAAATCTCGTCAATGGTTCTCCTTAAGATGAAGGAGACTGCC-GAGTC 296391 Query 550376 TTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTC 550434 || |||| | | || || | || || || | ||||| || || || || || || || Sbjct 296390 TTACTTGGGCTACAATGTCAACGACGCTGTCGTCACTGTCCCTGCCTACTTCAACGATTC 296331 Query 550435 ACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTAT 550494 || | || ||||| ||||| || || |||| | ||| | |||||||| ||||| || Sbjct 296330 TCAGAGACAGGCTACGAAAGACGCCGGTACTATTTCCGGAATGAATGTTCTCCGTATAAT 296271 Query 550495 CAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||| || || ||||||||||| | || || || || || || Sbjct 296270 CAACGAGCCCACTGCTGCTGCCATCGCCTACGGTCTCGACAA 296229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029214029009500