Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq16 120 2e-22 seq47 91.5 1e-13 >seq16 Length=421267 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | |||||||| || ||||| || || ||||| | || || | | Sbjct 331778 ACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACC 331837 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||| ||||| ||||| || |||| || ||||| || || ||||||||||| || Sbjct 331838 ATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTT 331897 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| ||| || ||| | || | |||||| || | ||||| || | ||||| Sbjct 331898 GTCCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGAT 331957 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || || || || | || || ||||| ||||||||| | |||||||| Sbjct 331958 GGTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCATGCCTCCGCGAAGA 332006 Score = 118 bits (130), Expect = 8e-22 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||||| ||| | |||||||| ||||| || || ||||||||||| | | Sbjct 332223 CCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAG 332282 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || ||||| ||||| || ||||| || | || ||||| || || ||| Sbjct 332283 AGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGA 332342 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || ||||| ||| ||| || | || | || || || | || ||| Sbjct 332343 ATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACT 332402 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || | |||| || || || || | || || || || ||||||||| | |||| ||| Sbjct 332403 TCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCATGCCTCCGCGGAGA 332462 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| || || || ||||| ||||| || || || || |||||||| | Sbjct 331995 CCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAA 332054 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | || ||||| ||||| || ||||| || | || || ||||| || ||| Sbjct 332055 AGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGA 332114 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || ||||| ||||| || || | || | ||||| || | ||||||| Sbjct 332115 ATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCACT 332174 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | |||| || || || || | || || ||||| ||||||||| Sbjct 332175 TCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATG 332222 >seq47 Length=240645 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || ||||||||||| | | || | | || ||||| ||| Sbjct 28415 TGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGC 28356 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| |||||| || || || |||||||| ||||| || ||||| || Sbjct 28355 TTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTC 28296 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| |||| ||||| || | |||| || || || || Sbjct 28295 GCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTG 28236 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 28235 AGGGTCTTGACGAAGATCTGCAT 28213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396270914053350