Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq16 123 2e-23 seq47 118 8e-22 >seq16 Length=421267 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| ||||| || || |||||||| || | ||| | || ||||||||| Sbjct 331791 TGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGC 331850 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || ||||| || ||||| || | |||| ||| |||||||| ||||||| Sbjct 331851 TTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTT 331910 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | || || || | ||||||||||| || || || || ||||| Sbjct 331911 GCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTG 331970 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || |||||||||||||| Sbjct 331971 AGGGTCTTAACAAAAATCTGCAT 331993 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || ||||| ||| || || || |||||||| || || | ||| Sbjct 332004 AGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTGCGA 332063 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||||||||| || ||||| || || || || ||||| | ||||| ||| ||| Sbjct 332064 CCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCC 332123 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || || | | | || || | ||||| |||| ||| Sbjct 332124 TTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCACTTCCAACGTG 332183 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || || |||||||||||||| Sbjct 332184 ATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCAT 332221 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || |||||||||||||| || || | || |||| ||||||||||| |||||||| Sbjct 332259 TCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAG 332318 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| ||| |||||||| ||||||| ||| || Sbjct 332319 ATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTG 332378 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||| || |||| ||| || || || ||||| | || || || Sbjct 332379 TCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACG 332438 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 332439 AAAATCTGCAT 332449 >seq47 Length=240645 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || ||||||||||| || || | || |||| ||||||||| Sbjct 28415 TGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGC 28356 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || |||||||| ||||| ||||| || || | |||| |||||| ||||| |||||| Sbjct 28355 TTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTC 28296 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | ||||||| ||||||||||| || || || || ||||| Sbjct 28295 GCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTG 28236 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || || |||||||| Sbjct 28235 AGGGTCTTGACGAAGATCTGCAT 28213 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || || || ||||| || || ||| | || |||| || | |||| Sbjct 27959 TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCGAGCTGC 27900 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || || ||||| |||||||| | ||||| |||||||||||| |||||| Sbjct 27899 TTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTT 27840 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || || | |||||| |||| ||| ||||| || ||||| Sbjct 27839 GCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTGCCCGTG 27780 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || || |||||||| Sbjct 27779 AGGGTCTTGACGAAGATCTGCAT 27757 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||| ||||| || || || | || |||| |||| |||||| || || || Sbjct 28176 CTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAA 28117 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || ||||| ||||| | || | ||||||||||| |||||| || ||| Sbjct 28116 AATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTCACATT 28057 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || | ||||||||||| ||| ||||| || ||||| | || || || Sbjct 28056 GTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGAC 27997 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 27996 GAAGATCTGCAT 27985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380930403850650