Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq14 159 6e-34 seq1189 136 7e-27 seq272 125 1e-23 seq22 96.9 6e-15 seq78 87.8 3e-12 >seq14 Length=427353 Score = 159 bits (176), Expect = 6e-34 Identities = 383/571 (67%), Gaps = 15/571 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | ||||||||||| || || ||| |||||| || || ||||| ||||| Sbjct 82212 ATATGGCAAATGTACAAGAAAGCCGAAGCATCATTCTGGACTGCTGAGGAGATGGATCTC 82153 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAG----ACGAGCAGCATTTTCTCAA 25592 | || ||| | | | |||| ||| | || || |||| | |||||| | Sbjct 82152 TCAAAAGACGTCCATGACTGG-ACGAACCGTCTTAATGACAACGAACGCCATTTTGTTTC 82094 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || || || ||||| || || || || || || || | Sbjct 82093 ACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATTGTCAATGAAAACCTCCTTGAACG 82034 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| ||| || || ||| | || ||| ||| |||||||| ||||| || || Sbjct 82033 TTTCTCCAATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATCATGAT 81974 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| || | |||||| || || ||||| | || Sbjct 81973 GGAGAACATTCACTCCGAGACCTACTC---GCTTCTCATCGACACTTACATCAAGGATTC 81917 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 |||| || | || || |||| ||||| || || || || ||||| | ||||| Sbjct 81916 CGCCCAGCGCGAATACCTCTTTGACGCCATGGAAACTATTCCTTGCGTCAAGCGCAAGGC 81857 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 ||||| | |||||||| | | | ||| | | || ||||| ||||| |||| | Sbjct 81856 TGACTGGGCACTCAAGTGGAT-ATCTGATCAGCGTTCCACATTTGGTGAGCGCTTGGTCG 81798 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 |||| ||||| || || |||||||| ||| ||||| |||||| | ||||||||| | | Sbjct 81797 CCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCCTTTGCGTCTATCTTCTGGTTGA 81738 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAG 26007 || || || ||||| || || ||| || |||||||||||||||||| | || ||| Sbjct 81737 AGAAGCGTGGTCTGATGCCTGGACT-TACGTTCTCCAACGAGCTCATCAGCCGTGATGAG 81679 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 ||| | |||| |||||||| ||| |||||| Sbjct 81678 GGTATGCACACCGATTTTGCTTGCTTGCTCT 81648 Score = 123 bits (136), Expect = 5e-23 Identities = 297/440 (68%), Gaps = 12/440 (3%) Strand=Plus/Plus Query 25600 TTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACC 25659 || || || ||||| || |||||||| ||||| ||||| |||||| ||| | || || Sbjct 83660 TTAGCTTTTTTTGCTGCGTCTGATGGCATAGTTAACGAAAATCTGGTTGAGCGTTTTTCC 83719 Query 25660 AGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAAT 25719 | ||||| ||| | || || || || || ||||||||||| || |||||| Sbjct 83720 AACGAAGTCCAGATCCCAGAAGCTCGATGCTTTTATGGTTTCCAGATCATGATTGAAAAT 83779 Query 25720 GTGCACTCTGAGGTGTATGCCAAGCTTCTGAT-GACGTACATTACA--GACGTCGCCGAG 25776 || || | ||| ||| | ||| || || ||| || || |||||| ||| Sbjct 83780 GTCCATGCAGAGACCTATTC---GCTCCTTATCGACACACTCGTCAAGGACGTCAATGAG 83836 Query 25777 AGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGG 25836 | | ||||||| |||||| ||| |||||| | ||||| | || || ||| Sbjct 83837 CGCCAGTATCTGTTTGATGCCATAGAGACCATACCGGCCGTCAAGCGAAAAGCAGACTGG 83896 Query 25837 GCCATGAAGTGGATCAACAGCCA--GAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 || | ||||| | | | || ||| || || |||| | ||||| || ||||||| Sbjct 83897 GCGTTACGATGGAT-ATCTGACAAGGAG-GCAACATTTGCCACTCGGCTAGTTGCCTTTG 83954 Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954 |||| || ||||| || || || ||| |||||||| | || ||||||||||| || Sbjct 83955 CTGCAGTCGAGGGTATATTCTTTTCCGGCTCGTTTGCATCAATATTCTGGCTCAAAAAGC 84014 Query 25955 AGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||| ||||| ||||| ||||| || |||||||| | |||||||| | Sbjct 84015 GTGGATTAATGCCGGGGCT-CACTTTCTCCAATGAACTCATCAGTCGTGACGAGGGGATG 84073 Query 26014 CACAGAGATTTTGCCTGCCT 26033 |||| || ||||| || || Sbjct 84074 CACACCGACTTTGCTTGTCT 84093 >seq1189 Length=1840 Score = 136 bits (150), Expect = 7e-27 Identities = 380/574 (66%), Gaps = 22/574 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||| |||| || || ||| |||||| || || ||||| || || Sbjct 1240 ATATGGCAAATGTACGAGAAAGCCGAAGCATCATTCTGGACTGCTGAGGAGATGGAGCTC 1299 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAG----ACGAGCAGCATTTTCTCAA 25592 | || ||||| | | |||| ||| | || || |||| | |||||| | Sbjct 1300 TCAAAAGACATCCATGACTGG-ACGAACCGTCTTAATGACAACGAACGCCATTTTGTTTC 1358 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || || || ||||| || || || || || || ||| | Sbjct 1359 ACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATTGTAAATGAAAACCTCCTTGAGCG 1418 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| || || || ||| | || ||| ||| |||||||| ||||| || || Sbjct 1419 TTTCTTCAATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATCATGAT 1478 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAG---CTTCTGATG---ACGTACATTACAGA 25766 || || | ||||| ||| |||| ||||| || || ||||| | || Sbjct 1479 GGAGAACATTCACTCCGAGA------CCAACTCACTTCTCATCGACACTTACATCAAGGA 1532 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 |||| || | || || |||| ||||| || || || || ||||| | || Sbjct 1533 TTCCGCC-AGCGCGAATACCTCTTTGACGCCATGGAAACTATTCCTTGCGTCAAGCGCAA 1591 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 ||| ||||| | |||||| | | | | ||| | | || || || ||||| ||| Sbjct 1592 GGCTGACTGGGCACTCAAGTGGGT-ATCTGATCAGCGTTCCACCTTCGGTGAGCGCTTGG 1650 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | ||||| ||||| || || |||||||| ||| ||||| ||||| |||||||||||| Sbjct 1651 TCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCTCTTGCGTCCATCTTCTGGC 1710 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGCAGGGAC 26004 | ||| || || ||||| || || ||| || |||||||||||||||||| | || Sbjct 1711 TGAAGAAGCGTGGTCTGATGCCTGGACT-TACGTTCTCCAACGAGCTCATCAGCCGTGAT 1769 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 || ||| | |||| |||||||| ||| |||||| Sbjct 1770 GAAGGTATGCACATCGATTTTGCTTGCTTGCTCT 1803 >seq272 Length=43472 Score = 125 bits (138), Expect = 1e-23 Identities = 184/255 (72%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 || |||| ||||| || || || || ||||| | ||||| ||||| | ||| Sbjct 3937 CTCTTTGACGCCATGGAAAGTATTCCTTGCGTCAAGTGCAAGGCTGACTGGGCACTCAAG 3878 Query 25846 TGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGA 25904 ||||| | | | ||| | | || ||||| ||||| |||| ||||| ||||| || || Sbjct 3877 TGGAT-ATCTGATCAGCGTTCCACCTTTGGTGAGCGCTTGGTCGCCTTCGCTGCCGTCGA 3819 Query 25905 GGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCAT 25964 |||||||| ||| |||| |||||| ||||||||||||| ||| || || || Sbjct 3818 AGGCATCTTCTTCTCTAGTTCTTTTGCGTCCATCTTCTGGCTGAAGAAGTGTGGTCTGAT 3759 Query 25965 GCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATT 26023 ||| || | ||| || |||||||||||||||||| | || || ||| | |||| |||| Sbjct 3758 GCCTGGACC-TACGTTCTCCAACGAGCTCATCAGCCGTGATGAAGGTATGCACATCGATT 3700 Query 26024 TTGCCTGCCTGCTCT 26038 |||| ||| |||||| Sbjct 3699 TTGCTTGCTTGCTCT 3685 >seq22 Length=397055 Score = 96.9 bits (106), Expect = 6e-15 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 25905 GGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCAT 25964 ||||||||| ||| ||||| |||||| ||||||||||||| ||| || || || Sbjct 301340 GGGCATCTTCTTCTCTGGTTCTTTTGCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTGAT 301399 Query 25965 GCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATT 26023 ||| || | |||| || ||||||||||||||| || | || || ||| | |||| |||| Sbjct 301400 GCCTGGAC-GTACGTTCTCCAACGAGCTCATCGGCCGTGATGAAGGTATGCACATCGATT 301458 Query 26024 TTGCCTGCCTGCTCT 26038 |||| ||| |||||| Sbjct 301459 TTGCTTGCTTGCTCT 301473 >seq78 Length=184271 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 222056 ATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTC 222115 ||||||||||| | || | ||| | | ||| |||||| || | ||||||||| Sbjct 133830 ATCCACAGCGCGTAGAACAAATCACGCGCCCGTGACTCCTCTTTACCATGATTTTTCCTC 133889 Query 222116 AGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCG 222175 || || | || ||||| ||||||| |||||| || || || || | || | ||| || Sbjct 133890 AGGTCGAGGAAATCAAATATGTCAGGGTGCCATGGTTCAAGGTAAATCGCAAAAGCTCCC 133949 Query 222176 GGTCGCTTGTTGCCACCCTGATCCAC 222201 ||||||||||||||||| ||||| || Sbjct 133950 GGTCGCTTGTTGCCACCTTGATCGAC 133975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928826803632000