Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq16 120 2e-21 seq47 93.3 3e-13 >seq16 Length=421267 Score = 120 bits (132), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||| ||||| || || || || | |||||||||| || || Sbjct 331772 ACGAAGACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGT 331831 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | |||||||| || || || || |||||||| ||||||||||| || Sbjct 331832 ACGACCATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCC 331891 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| ||||||||| || ||| || ||||| || | || | | | ||| Sbjct 331892 TTCCTTGTCCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAA 331951 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| |||||||| ||||| || Sbjct 331952 -AGTGATGGTCTTCCCCGTGAGGGTCTTAACAAAAATCTG 331990 Score = 114 bits (126), Expect = 8e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || || ||||| || ||| || || ||| ||||| | || || Sbjct 332228 ACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAGAGTGT 332287 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||| | |||||||| ||||| || || |||||||| ||||||||||| || Sbjct 332288 GCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCC 332347 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| ||||||||| ||| || || || ||||| | | | | || ||| Sbjct 332348 TTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACTTCCAA 332407 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| |||||||||||||| || Sbjct 332408 -CGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTG 332446 Score = 89.7 bits (98), Expect = 3e-12 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| | |||||||||||||| ||||| ||||| |||||||| ||||| ||||||||| Sbjct 332067 TCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTG 332126 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| || || || || || || || || | || | | || ||| || || Sbjct 332127 TCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCACTTCCAA-CGTGAT 332185 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| ||||| ||||| || ||||| || Sbjct 332186 GGTCTTACCCGTGAGGGTCTTGACAAAAATCTG 332218 >seq47 Length=240645 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| ||||| || ||||| || || | || || || | ||||| Sbjct 27978 ACGAAGACGGAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 27919 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||| || ||||| ||||| || || || |||||||||||||| ||||| || Sbjct 27918 ACGTCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCC 27859 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| || |||||| || || || || || |||| || | | || ||| Sbjct 27858 CTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAA 27799 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| ||||| || || Sbjct 27798 -CGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 27760 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| ||||| || || ||| || || || || || || | || || Sbjct 28206 ACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGT 28147 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||| || ||||| || || ||||| || || || ||||| ||||| || || Sbjct 28146 GCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACC 28087 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||||||||| || ||| || ||||| |||| | | | | ||| Sbjct 28086 CTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCCAA 28027 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| ||||| || || Sbjct 28026 -CGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 27988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268112712979400