Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq14 96.9 7e-15 seq16 95.1 2e-14 >seq14 Length=427353 Score = 96.9 bits (106), Expect = 7e-15 Identities = 167/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 49823 ACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAA 49882 ||| ||||| || || || | |||||||| | | || | |||||| ||||| | Sbjct 84091 ACAAGCAAAGTCGGTGTGCATCCCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAG 84032 Query 49883 TCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAA 49942 || ||||||||||| | |||||| ||||| |||||||||||||| | |||||||| Sbjct 84031 CCCCGGCATTAATCCACGCTTTTTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAA 83972 Query 49943 TATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAA 50002 |||||||||||| ||||| || | || | | |||| || | | || | Sbjct 83971 TATACCCTCGACTGCAGCAAAGGCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGA 83912 Query 50003 TATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 50062 |||||| || ||||| ||||||||| |||| | ||||| | ||||| || | Sbjct 83911 TATCCATCGTAACGCCCAGTCTGCTTTTCGCTTGACGGCCGGTATGGTCTCTATGGCATC 83852 Query 50063 AAA 50065 ||| Sbjct 83851 AAA 83849 >seq16 Length=421267 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || | |||||| || || || || | |||| ||| || ||| || ||||| Sbjct 331992 ATGCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCC 332051 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || ||||| || || ||||||||||| | | || |||||||| Sbjct 332052 GAAAGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGG 332111 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| || || || || | || || ||||| Sbjct 332112 GGAATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCC 332171 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || ||||| ||||| || | || || | ||| |||||||| Sbjct 332172 ACTTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCAT 332221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984460448842500