Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq16 91.5 3e-13 seq14 86.0 1e-11 >seq16 Length=421267 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| |||||||| | | || |||| ||||| || || || ||||| || | | Sbjct 332267 AATATTGTAATCTGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCG 332326 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||||| || || ||||| || || || || || ||| || || || || Sbjct 332327 TTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGT 332386 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || || |||||||| | || ||||| || || || | || |||| ||| ||||| Sbjct 332387 ATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTG 332446 Query 172067 CAT 172069 ||| Sbjct 332447 CAT 332449 >seq14 Length=427353 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 39125 ACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAA 39184 ||| ||||| || || || | || ||||| | | || | |||||| ||||| | Sbjct 84091 ACAAGCAAAGTCGGTGTGCATCCCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAG 84032 Query 39185 TCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAA 39244 || ||||||||||| | |||||| ||||| |||||||||||||| | |||||||| Sbjct 84031 CCCCGGCATTAATCCACGCTTTTTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAA 83972 Query 39245 TATACCCTCCAC 39256 ||||||||| || Sbjct 83971 TATACCCTCGAC 83960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905118462990000