Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq118 100 8e-16 seq6 100 8e-16 >seq118 Length=119656 Score = 100 bits (110), Expect = 8e-16 Identities = 215/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||| | ||| |||| ||||| | ||||||||||||||||||||| | || || Sbjct 58342 CATCACGTCCTCCAATGCCTTGACGAGACGACGCTGAATATAACCAGTCTCTGCCGTCTT 58401 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 || || |||||||| ||||| | | ||| |||| ||||||||||| | ||| | ||| Sbjct 58402 GACGGCCGTATCAATAAGACCTTCTCTTCCAGCCATGGCATGGAAGAAAAACTCCTGCGG 58461 Query 302685 TCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCT-CGGGC-GAATCGTC 302741 ||| | ||| | | | | ||| |||| ||||| ||||| |||| ||||| ||| ||| Sbjct 58462 -CGTCAACCCTCGTAGATATGAGTTCTCGACGAAGCCACGTGCCTCCGGGCTGAA--GTC 58518 Query 302742 GAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATC 302801 | ||| || || || || ||||| | | | ||| ||||||| || || || Sbjct 58519 GTCCTTAGTGAAATGAGGAAGGGTACGATGACGGAACCCGAATGGGATTCGACGACCTTC 58578 Query 302802 AACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGA 302861 ||| | ||||| || | || | ||| ||||| || || | | |||||||| Sbjct 58579 AACACTTTGCTGCCCGACACAGACAGACATTTGCGAGATGTTGATGTATGAACCCTTGGA 58638 Query 302862 GCCAGCATTTACCAT 302876 ||||| | ||||| Sbjct 58639 ACCAGCTGTGACCAT 58653 >seq6 Length=564013 Score = 100 bits (110), Expect = 8e-16 Identities = 181/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 251392 TTATTGTATGAGGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGAT 251451 |||| |||||| ||| | ||| ||| ||| || ||||| | | ||| |||||| Sbjct 275584 TTATAGTATGAATCGA-ACGACT-CACATATCGCAAACATGCAAACGGTAGGCATCACTA 275527 Query 251452 GCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGC 251511 || ||| | | || | || ||||| || |||| || ||||||||||||||||| Sbjct 275526 GCCTCAAACAAGCGCTCTTTCAGGAAGCCAGCAACACCATGCGAAATCATACAATCACGT 275467 Query 251512 TCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTG 251571 ||||| || |||||||| ||||| ||||| || | |||||| |||| || || || Sbjct 275466 TCCATCTCTCCGAAACGGAGACCTCCATCACGGCTACGACCCTCCACAGGTTGTCGCGTC 275407 Query 251572 AGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGA 251631 | | || |||||| | ||| ||| ||| || | |||||||| |||||| Sbjct 275406 AAGATCTGCACAGGACCTCGTGCGCGCGAATGGATCTTGTCGTCCACCATATGTTTGAGA 275347 Query 251632 CGCTGGTAGAATGCGGGACCGA 251653 || |||||| | | ||| |||| Sbjct 275346 CGTTGGTAGTACGTGGGGCCGA 275325 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/146 (75%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 || |||||||| ||| || ||||| |||||||| | ||||| || | ||| || Sbjct 275133 ATGGTCATACGCGAGGGGATGGCATGAGGATTGATAACAATGTCAGGAACGATTCCCTCG 275074 Query 251905 GCAGTGAAGGGCATATCCTTTTCC--TCAATAA-TGTTTCCAATAGTTCCCTTTTGTCCG 251961 ||||||||||||||||| |||| || ||| || | |||||||| ||||| || ||| Sbjct 275073 GCAGTGAAGGGCATATC---TTCCTGTCGGTAAGTGATACCAATAGTCCCCTTCTGGCCG 275017 Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987 |||||||| ||||| || ||||| Sbjct 275016 TGACGAGACGCAAACTTGTCGCCAAT 274991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471788370622350