Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq16 127 2e-24 seq47 84.2 2e-11 >seq16 Length=421267 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || ||||| || || ||| | ||||| ||| | || Sbjct 332221 ATGCAGATTTTTGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAAGTGGAATCATCC 332162 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||||||||| ||||| || || || ||||| Sbjct 332161 GACACCATCGACAACGTGAAGGCGAAA-ATCCAAGACAAGGAAGGCATTCCCCCTGATCA 332103 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||| | |||||||| || || ||| |||| || | | | || ||||| || Sbjct 332102 GCAACGCCTTATCTTTGCTGGAAAGCAGTTGGAAGACGGTCGCACGCTTTCGGATTACAA 332043 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || |||||||| ||||| | ||||||||| Sbjct 332042 CATCCAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTTCGCGGAGGC 331994 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || || || || || || || ||| | |||||||| || || Sbjct 332449 ATGCAGATTTTCGTTAAGACCCTCACGGGGAAGACCATCACGTTGGAAGTAGAGTCCTCC 332390 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||| || ||||| ||||| || ||||| || ||| Sbjct 332389 GATACCATCGACAACGTGAAAGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAA 332330 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | ||||||||||| || ||| |||| || | | | |||||||| || Sbjct 332329 CAACGCCTCATCTTTGCCGGAAAGCAGTTGGAAGACGGCCGCACACTCTCAGATTACAAT 332270 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| |||||||| || || ||| | || | || | || |||||| Sbjct 332269 ATTCAGAAGGAATCCACCCTTCACCTCGTTCTACGTCTCCGTGGAGGC 332222 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| |||| || || || || || || || || | || || || | || Sbjct 331993 ATGCAGATTTTTGTTAAGACCCTCACGGGGAAGACCATCACTTTGGAGGTGGAGTCATCC 331934 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || ||||| ||||| || ||||| || ||| Sbjct 331933 GACACTATCGACAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAA 331874 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||| || || || ||| |||| ||| | | | || ||||||||| Sbjct 331873 CAACGCCTGATCTTCGCAGGAAAGCAGTTGGAAGATGGTCGTACGCTCTCTGATTATAAC 331814 Query 24884 ATTCAAAAGGA 24894 || |||||||| Sbjct 331813 ATCCAAAAGGA 331803 >seq47 Length=240645 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || ||| | ||||| || | | Sbjct 27757 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAAGTGGAGTCATCT 27816 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| || || || || || |||||| Sbjct 27817 GACACCATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAA 27876 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | ||||| || || || ||||| || || | | | || || || ||| Sbjct 27877 CAACGACTCATCTTCGCTGGCAAGCAGCTCGAAGACGGACGTACTCTTTCCGACTACAAC 27936 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || ||||| ||| Sbjct 27937 ATCCAGAAGGAGTCCACACTCCAC 27960 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| || || || | || || || | | Sbjct 28213 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACAATCACATTGGAGGTGGAGTCGTCA 28272 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || |||||||| || || || || || || Sbjct 28273 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAAGAGGGCATTCCACCAGACCAG 28332 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||||||||| || ||| ||||||| | | | |||| ||||| || Sbjct 28333 CAGCGTCTGATCTTTGCCGGAAAGCAGTTGGAGGACGGGCGCACGCTGTCGGATTACAAT 28392 Query 24884 ATTCAAAAGGA 24894 || || ||||| Sbjct 28393 ATCCAGAAGGA 28403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449888883234000