Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq47 134 9e-27 seq16 129 4e-25 seq39 93.3 3e-14 >seq47 Length=240645 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||||||||||||||| || || || ||||| || ||||| | || Sbjct 28424 AGTACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCC 28365 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||| |||||||| || ||||||||| | || | ||||| ||||| Sbjct 28364 TCCAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCC 28305 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | || || ||| Sbjct 28304 TGAATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTC 28245 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || ||||||||||| Sbjct 28244 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 Score = 111 bits (122), Expect = 1e-19 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||||||||| ||||| || ||| |||| | || Sbjct 28196 AGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCT 28137 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || ||||| || || || ||||| || | || | ||||||||||| Sbjct 28136 TCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCT 28077 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| ||| | ||| || || | || || Sbjct 28076 TGAATCTTCGCCTTCAC--AT--TGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGAT 28021 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| |||||||||||||| || |||||||||||| Sbjct 28020 CGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 27984 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||| ||||| ||||| || || | || | || Sbjct 27968 AGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCT 27909 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| |||||||| || || | || | ||||||||||| Sbjct 27908 TCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCC 27849 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || ||| | || | ||| | ||| || || | || || ||| Sbjct 27848 TGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTC 27789 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||||||||||||| || |||||||||||| Sbjct 27788 TTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 27756 >seq16 Length=421267 Score = 129 bits (142), Expect = 4e-25 Identities = 160/217 (74%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||||||||||| || |||||||| || || || | || |||| Sbjct 331782 AGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCT 331841 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| ||||||||||| ||||| ||||| | || | || |||||||| Sbjct 331842 TCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCC 331901 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || ||| || || || | ||||| || | ||| || || | || || Sbjct 331902 TGAATCTTTGCCTTCAC--AT--TGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGAT 331957 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| |||||||||||||| ||||| ||||||||| Sbjct 331958 GGTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCATG 331994 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||| ||||||||||| || || || || || |||| | || Sbjct 332238 AGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCT 332297 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||| ||||| || ||||| ||||| | || | || |||||||| Sbjct 332298 TCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCC 332357 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||| ||| | || | || || ||| || || | || |||||| Sbjct 332358 TGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTC 332417 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||||||||||||| || || ||||||||| Sbjct 332418 TTCCCCGTGAGGGTCTTAACGAAAATCTGCATG 332450 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 10/219 (5%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||||| ||||| || ||||||||| ||||| || ||||| || |||| | || Sbjct 332009 CAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACCGTC 332068 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| |||||||| || ||||| || |||||||| || | || | || |||||||| Sbjct 332069 TTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTGTC 332128 Query 34885 GTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939 | ||||| || ||| |||| | ||| | ||| | || || | || Sbjct 332129 TTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATT-----CCACTTCCAACGTG 332183 Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| |||||||||||||| ||||| ||||||||| Sbjct 332184 ATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATG 332222 Score = 93.3 bits (102), Expect = 3e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 34768 GACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTC 34827 ||||||||||| ||| |||||||| ||||| || |||||||| |||| |||| || Sbjct 332468 GACCAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGATAGCGTGCGGCCATCTTC 332527 Query 34828 CAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || |||||||| |||||||| || ||||||||||| Sbjct 332528 AAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTC 332563 >seq39 Length=270505 Score = 93.3 bits (102), Expect = 3e-14 Identities = 155/223 (70%), Gaps = 12/223 (5%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| ||||| || | ||||| || |||||| ||||| || |||||||| Sbjct 5995 CCCCCTCTCAGCCTCAAGATTAAATGAATCGTCGACTCCTTTTGAATATTGTAGTCCGAA 5936 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| ||||| || || ||||| ||||||| || ||||||||||| | || Sbjct 5935 AGCTTGCGGTCATCTTCAAGCGTGTTTCCAGCGAAGACGAGCCGTTGCTGGTCCGGTGGA 5876 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGAC-----GGATGCTATCGATTCATT-GGCC 34924 | || |||||||| | || ||| |||||| | | | |||| | || ||| Sbjct 5875 ATTCCTTCCTTGTCTTGAATCTTTGATTTGACACTGTGTACGGAATCGTCACTTTCTGCC 5816 Query 34925 TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 |||| | ||||||||||||||| |||||||| |||| Sbjct 5815 CAGACAAC------TATGGTCTTTCCCGTAAGGGTCTTCACAA 5779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686647459450