Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq8 104 2e-16 seq41 91.5 1e-12 >seq8 Length=540487 Score = 104 bits (114), Expect = 2e-16 Identities = 251/380 (66%), Gaps = 0/380 (0%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || || || || ||||| ||||| | ||| | || | || || | || Sbjct 296076 ACGAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGCCTTCACC 296135 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || || || | || ||| || | |||||| |||||| || || | ||| Sbjct 296136 TCGAAGATACCCTCCTCGATAGTCAACAGGGACACATCAAAGGTTCCTCCTCCAAGATCG 296195 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 ||||| || || || || | | || || || ||||| || || | |||||| Sbjct 296196 AAAATGAGGACGTTACGCTCACCGACAACTTTCTTGTCGAGACCGTAGGCGATGGCAGCA 296255 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||| || || || || || | | |||||| | || | ||| | || || ||||| Sbjct 296256 GCAGTGGGCTCGTTGATTATACGGAGAACATTCATTCCGGAAATAGTACCGGCGTCTTTC 296315 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481 || || ||||| || |||||||| || || ||||| ||||| | || || || | || Sbjct 296316 GTAGCCTGTCTCTGAGAATCGTTGAAGTAGGCAGGGACAGTGACGACAGCGTCGTTGACA 296375 Query 282482 TCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 282541 | | || | |||| || || | ||||| ||| | || |||||| || ||| Sbjct 296376 TTGTAGCCCAAGTAAGACTCGGCAGTCTCCTTCATCTTAAGGAGAACCATTGACGAGATT 296435 Query 282542 TGTTCTGGAGAATATTGCTT 282561 | ||| |||||| | | ||| Sbjct 296436 TCTTCGGGAGAAAACTCCTT 296455 >seq41 Length=273570 Score = 91.5 bits (100), Expect = 1e-12 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 282337 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 282396 ||| | |||||| |||| |||||||||||| |||||||| || | | || || | ||| Sbjct 112297 ATCCAAACCATAGGCAAGAGCAGCAGCAGTCGGTTCATTGATTACCCGCAGCACTTCAAG 112238 Query 282397 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 282456 |||||| || || ||||| || || ||||||| ||||| || || || || ||||| Sbjct 112237 ACCAGCGATCTGACCAGCATCCTTCGTTGCTTGTCGTTGTGCGTCATTGAAGTAGGCAGG 112178 Query 282457 AACAGTAATAACGGC 282471 ||||| || || || Sbjct 112177 TACAGTGATGACAGC 112163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740554301550300