Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq16 158 2e-33 seq47 141 2e-28 >seq16 Length=421267 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| ||||| | ||| || || ||||| ||||| ||||| ||||| || Sbjct 332223 CCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAG 332282 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | |||||||| | || ||||| |||||||| || | |||||| || ||||| Sbjct 332283 AGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGA 332342 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || |||||||||||||| || || || || ||||| | |||||| Sbjct 332343 ATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACT 332402 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| || || | ||||| || || |||||||| Sbjct 332403 TCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||||| || ||||| || ||||| || ||||| || || ||||| || Sbjct 331995 CCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAA 332054 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||||||| | || |||||||||||||| || | ||| ||||| || || Sbjct 332055 AGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGA 332114 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| ||||| || || || || || || || || || || | ||| ||| Sbjct 332115 ATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCACT 332174 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| || || | ||||| ||||| |||||||| Sbjct 332175 TCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCAT 332221 Score = 132 bits (146), Expect = 9e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||| || || || || || || ||||||||||| || | | ||| Sbjct 331778 ACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACC 331837 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| | || ||||| || ||||| || | |||||| || ||||| || |||||||| Sbjct 331838 ATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTT 331897 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || ||||||||||| || ||||| || || || || | || || |||||||| || Sbjct 331898 GTCCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGAT 331957 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | ||||| ||||| |||||||| Sbjct 331958 GGTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCAT 331993 >seq47 Length=240645 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||| || || || || ||||| || || || || || ||| | | || Sbjct 27972 ACGGAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCC 27913 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || || || ||||| ||||| |||| ||||||||| || || || || ||||| Sbjct 27912 GTCTTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTT 27853 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || |||||||| || || || || || || ||| | || |||||||| || || Sbjct 27852 GTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGAT 27793 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || | ||||| || || |||||||| Sbjct 27792 CGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27757 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| ||||| | ||| || ||||| || ||||| || || || || | Sbjct 28213 TACCGCCACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGG 28154 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||||| || || || || || || || || | || ||||| |||| Sbjct 28153 AAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAG 28094 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||||||||| || || ||||| || || || ||| || || | Sbjct 28093 GGATACCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCA 28034 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || ||||||||||| || | ||||| || || |||||||| Sbjct 28033 CCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981807701525450