Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq47 111 2e-19 seq16 98.7 1e-15 >seq47 Length=240645 Score = 111 bits (122), Expect = 2e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| ||| | ||| ||| || ||||||||||| Sbjct 28182 GGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCC 28123 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| |||||||| ||||||||||| || |||||||| ||||| ||| Sbjct 28122 TGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTT 28063 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | | |||||| || | |||| || ||||| || || || Sbjct 28062 CACATTGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGTGAGGGT 28003 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 28002 CTTGACGAAGATCTGCATG 27984 Score = 104 bits (114), Expect = 2e-17 Identities = 146/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| ||| | || ||| ||| ||||||||||||| Sbjct 27953 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT--ACGTCCGTCTTCGAGCTGCTTGC 27896 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| || || || || || || ||||| |||||||| ||||||| || Sbjct 27895 CAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCT 27836 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | |||||| || | |||| || ||||| || || | Sbjct 27835 TCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTGCCCGTGAGGG 27776 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || ||||| ||||||||| || Sbjct 27775 TCTTGACGAAGATCTGCATGCCT 27753 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| ||||||||||| || |||| | |||||| | |||||| || Sbjct 28410 GGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGCTTTCC 28351 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || || ||||| || ||||| ||||| ||| Sbjct 28350 GGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTCGCCTT 28291 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | |||||| || | |||| || || || || || || Sbjct 28290 GACGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTGAGGGT 28231 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 28230 CTTGACGAAGATCTGCAT 28213 >seq16 Length=421267 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || ||||| ||||||||||| | ||| ||| || | |||||| || Sbjct 332252 GGTGGATTCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCC 332311 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || || ||||| ||||| |||||||||||||| |||||| || Sbjct 332312 GGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTT 332371 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || |||| || ||| || || | |||| ||| || || || || || Sbjct 332372 CACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTGAGGGT 332431 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || ||||||||||||||| || Sbjct 332432 CTTAACGAAAATCTGCATGCCT 332453 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || | |||||| || ||| | || || || || ||||| ||||| |||||||||||| Sbjct 331839 TCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTG 331898 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | ||||||| | |||||| || | |||| | Sbjct 331899 TCCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATG 331958 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 || || || || || || || || |||||||||||| || Sbjct 331959 GTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCATGCCT 331997 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | |||| ||| ||| || | |||||| || Sbjct 332025 GTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACC-GTCTTCCAACTGCTTTCC 332083 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || || ||||| || || || |||||||||||||| ||| || ||| Sbjct 332084 AGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTGTCTTGGATTTTCGCCTT 332143 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||||| || | |||| ||| || || || || || Sbjct 332144 CACGTTGTCGATGGTGTCGGATGATTCCACTTCCAACGTGATGGTCTTACCCGTGAGGGT 332203 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || || |||||||||||| || Sbjct 332204 CTTGACAAAAATCTGCATGCCT 332225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483411433722000