Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq16 123 2e-23 seq47 120 2e-22 >seq16 Length=421267 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || ||||| || || || ||| || || ||||||||||| || || ||||| | Sbjct 332006 ACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACC 332065 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| ||||| || ||||| ||||| || | || |||||||| | || | ||||| || Sbjct 332066 GTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTT 332125 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| |||||| ||| || | ||| | ||||||| ||||||||| || | ||||| Sbjct 332126 GTCTTGGATTTTCGCCTTC-ACGTTGTCGATGGTGTCGGATGATTCCACTTCCAACGTGA 332184 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || ||||| || | || || ||||| |||||||| Sbjct 332185 TGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCAT 332221 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || |||||||| ||||||||||| |||| ||||| || ||||||||||| Sbjct 332259 TCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAG 332318 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | || || || || | || | ||||| ||||| ||| || || || || | Sbjct 332319 ATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTT-TGCTTTCACGTT 332377 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||| ||| || || || || | |||||| || || || || | || || || Sbjct 332378 GTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAAC 332437 Query 33738 AAAGATCTGCAT 33749 || |||||||| Sbjct 332438 GAAAATCTGCAT 332449 >seq47 Length=240645 Score = 120 bits (132), Expect = 2e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || |||||||| || || || |||||||| || || ||||| |||| ||||| || Sbjct 28415 TGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGC 28356 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||||||||| |||| ||||||||| ||| | || | || |||||||| ||| ||| Sbjct 28355 TTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTC 28296 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | || | ||| | |||||| || ||||| || | ||||| || ||||| || Sbjct 28295 -GCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGT 28237 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 28236 GAGGGTCTTGACGAAGATCTGCATA 28212 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| ||||| || ||||| |||| |||| || || || || || Sbjct 28176 CTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAA 28117 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||| | ||||||||||| | || | ||| || ||||| ||| ||| ||| |||| Sbjct 28116 AATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTC-ACAT 28058 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||| || ||||| || | ||||||||| || || || | || || | Sbjct 28057 TGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGA 27998 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 27997 CGAAGATCTGCAT 27985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697790576000