Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq16 132 1e-25 seq47 127 5e-24 >seq16 Length=421267 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| || || || ||||| |||||||||||| || ||| Sbjct 332218 CAGATTTTTGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAAGTGGAATCATCCGAC 332159 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || ||||| || ||||| ||| || || ||| Sbjct 332158 ACCATCGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGCATTCCCCCTGATCAGCAA 332099 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| || ||||||||||||||||| || | || | | ||||||||| || Sbjct 332098 CGCCTTATCTTTGCTGGAAAGCAGTTGGAAGACGGTCGCACGCTTTCGGATTACAACATC 332039 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| |||||||| |||||| | || ||| | ||||| Sbjct 332038 CAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTTCG 332001 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| || || || ||||||||||| ||||| || ||| Sbjct 331990 CAGATTTTTGTTAAGACCCTCACGGGGAAGACCATCACTTTGGAGGTGGAGTCATCCGAC 331931 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || || ||||| ||| || ||| ||| Sbjct 331930 ACTATCGACAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAACAA 331871 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| |||||||||||||||||||| | || | | ||||| ||| || Sbjct 331870 CGCCTGATCTTCGCAGGAAAGCAGTTGGAAGATGGTCGTACGCTCTCTGATTATAACATC 331811 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||| || |||||||||||| | | ||||| Sbjct 331810 CAAAAGGAGAGCACCCTTCACCTTGTTCTTCGTCTTCG 331773 Score = 104 bits (114), Expect = 6e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| |||||||| || || || || |||| Sbjct 332434 AAGACCCTCACGGGGAAGACCATCACGTTGGAAGTAGAGTCCTCCGATACCATCGACAAC 332375 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || |||||||| |||||| || || ||||| ||| || ||| ||| | || ||||| Sbjct 332374 GTGAAAGCAAA-GATTCAGGACAAGGAAGGCATTCCTCCTGACCAACAACGCCTCATCTT 332316 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||||||||||||||||| || | || | | |||||||| | ||||| || || Sbjct 332315 TGCCGGAAAGCAGTTGGAAGACGGCCGCACACTCTCAGATTACAATATTCAGAAGGAATC 332256 Query 206364 TACTCTTCACCTTGTT 206379 || |||||||| ||| Sbjct 332255 CACCCTTCACCTCGTT 332240 >seq47 Length=240645 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || |||||||| ||||||||||| |||||| Sbjct 27760 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAAGTGGAGTCATCTGAC 27819 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||| || || || || || ||| || || ||| Sbjct 27820 ACCATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAACAA 27879 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| |||||||| || |||||| | ||||| ||| | ||| | |||| |||||| || Sbjct 27880 CGACTCATCTTCGCTGGCAAGCAGCTCGAAGACGGACGTACTCTTTCCGACTACAACATC 27939 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || || ||||||||| | | ||||| Sbjct 27940 CAGAAGGAGTCCACACTCCACCTTGTTCTCCGTCTTCG 27977 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || |||||||| ||||| ||||| ||||||| Sbjct 27988 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAGGTGGAGTCTTCTGAC 28047 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || || || || || Sbjct 28048 ACTATCGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCCGATCAGCAG 28107 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || ||||| || |||||| ||||||| || | || | |||| |||||| | Sbjct 28108 CGCCTCATTTTCGCAGGCAAGCAGCTGGAAGACGGCCGCACCCTTTCCGACTACAACATT 28167 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| |||||||| || ||||||||| | | ||||| Sbjct 28168 CAGAAGGAGTCTACCCTCCACCTTGTTCTCCGTCTTCG 28205 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| ||||| ||||| || ||| Sbjct 28216 CAGATCTTCGTCAAGACCCTCACGGGTAAGACAATCACATTGGAGGTGGAGTCGTCAGAC 28275 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || ||||| || ||| || ||| || Sbjct 28276 ACCATCGACAACGTCAAGGCGAAGATTCAGGACAAAGAGGGCATTCCACCAGACCAGCAG 28335 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||||||||||||||| || || | || || | |||||||| || Sbjct 28336 CGTCTGATCTTTGCCGGAAAGCAGTTGGAGGACGGGCGCACGCTGTCGGATTACAATATC 28395 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||| || ||||||||||| Sbjct 28396 CAGAAGGAGAGCACCCTTCACCTTGT 28421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181797329777550