Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq16 84.2 2e-11 seq47 82.4 7e-11 >seq16 Length=421267 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||| || |||| | |||| || || ||||| || ||||| |||||||| || Sbjct 332295 TCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTG 332354 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| ||| ||||| | || | ||||||| | ||| ||||| | ||| | Sbjct 332355 TCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATG 332414 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 || || || || || || || | ||||||||||||| || Sbjct 332415 GTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCATGCCT 332453 >seq47 Length=240645 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||||| ||||||||||| || || | Sbjct 27950 GACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCGAGCTGCTTGCCAGCG 27891 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || || |||||||| || || ||||| || || || || ||| |||| Sbjct 27890 AAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACG 27831 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | ||||||||| | ||| | ||| || || || || || || Sbjct 27830 TTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTG 27771 Query 132110 ATGAAAATCTGCATGACT 132127 | ||| ||||||||| || Sbjct 27770 ACGAAGATCTGCATGCCT 27753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476601965658000