Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq14 165 1e-34 seq1189 161 1e-33 >seq14 Length=427353 Score = 165 bits (182), Expect = 1e-34 Identities = 371/543 (68%), Gaps = 17/543 (3%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| | |||| |||| || || || ||||| || |||||| | || | Sbjct 82213 GATATGGCAAATGTACAAGAAAG-CCGAAGCATCATTCTGGACTGCTGAGGAGATGGATC 82155 Query 1455835 TCGGCGCCGACACGGTCCA---CTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCA 1455888 || ||| ||||| |||| | || || | ||| |||| |||||||| Sbjct 82154 TCTCAAAAGAC---GTCCATGACTGGACGAACCGTCTTAATGACAACGAACGCCATTTTG 82098 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 | |||||||||||||| || ||| || ||||||||| || || ||||| Sbjct 82097 TTTCACACGTCCTCGCCTTCTT-CGCTGCATCCGATGGCATTGTCAATGAAAACCTCCTT 82039 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | || || || |||||||| | || || || | || ||||| ||||| ||| Sbjct 82038 GAACGTTTCTCCAATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATC 81979 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||| ||||| || ||||||||||| || |||||||| ||| ||||||| Sbjct 81978 ATGATGGAGAACATTCACTCCGAGACCTACTCGCTTCTCATCGACACTTACATCAAGGAT 81919 Query 1456069 CCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 | | | || || |||||||| |||||| || || | || | || | | ||| Sbjct 81918 TCCGCCCAGCGCGAATACCTCTTTGACGCCATGGAAACTATTCCTTGCGTCAAGCGCAAG 81859 Query 1456129 GCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 || |||||||| | |||||||| | || | || ||| |||| ||||| | | Sbjct 81858 GCTGACTGGGCACTCAAGTGGATATCTGATCAGCG-TTCCACA-TTTGGTGAGCGCTTGG 81801 Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGG 1456246 ||| ||| || | |||||| |||||||| ||||| || || |||| | ||||| ||| Sbjct 81800 TCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCCTT-TGCGTCTATCTTCTGG 81742 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGA 1456306 | |||||||| || || ||||| || ||| | || |||||| | ||||| || || Sbjct 81741 TTGAAGAAGCGTGGTCTGATGCCTGGACTTACG-TTCTCCAACGAGCTCATCAGCCGTGA 81683 Query 1456307 CGA 1456309 || Sbjct 81682 TGA 81680 Score = 95.1 bits (104), Expect = 2e-13 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 |||| ||||| ||||||||||||| |||||||||||||||||| || || || || || Sbjct 81498 TGGC-CTCATTGGCATGAACGCCAA-GCTCATGTGCCAGTACATCGAGTTC-GTTGCAGA 81442 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 |||| || | | | |||| ||| || | | ||| | ||||||| || | Sbjct 81441 CCGCTTGTTGGTGTCGCTGGGCAACGACAAGGTGTTACAACGCCACCAACCCATTTGACT 81382 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGT 1456756 ||||| |||||||||| |||| ||||||||||| |||||| |||||| | || | Sbjct 81381 TCATGGACATGATCTCGCTACAGGGGAAGACCAACTTCTTCGAGAAGCGCGTGTCAGACT 81322 Query 1456757 ACGCCAAGGCCGGCGTCA 1456774 || | ||||| ||||| Sbjct 81321 ACTCAAAGGCGAACGTCA 81304 >seq1189 Length=1840 Score = 161 bits (178), Expect = 1e-33 Identities = 372/545 (68%), Gaps = 18/545 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| | |||| |||| || || || ||||| || |||||| | || | Sbjct 1239 GATATGGCAAATGTACGAGAAAG-CCGAAGCATCATTCTGGACTGCTGAGGAGATGGAGC 1297 Query 1455835 TCGGCGCCGACACGGTCCA---CTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCA 1455888 || |||| |||| |||| | || || | ||| |||| |||||||| Sbjct 1298 TCTCAAAAGACA---TCCATGACTGGACGAACCGTCTTAATGACAACGAACGCCATTTTG 1354 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 | |||||||||||| || ||||| || ||||||||| || || ||||| Sbjct 1355 TTTCACACGTCCTCGCC-TTCTTCGCTGCATCCGATGGCATTGTAAATGAAAACCTCCTT 1413 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | || || | || |||||||| | || || || | || ||||| ||||| ||| Sbjct 1414 GAGCGTTTCTTCAATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATC 1473 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||| ||||| || ||| |||| || || |||||||| ||| ||||||| Sbjct 1474 ATGATGGAGAACATTCACTCCGAGACCAACTCACTTCTCATCGACACTTACATCAAGGAT 1533 Query 1456069 CCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 | | | || || |||||||| |||||| || || | || | || | | ||| Sbjct 1534 TCCG-CCAGCGCGAATACCTCTTTGACGCCATGGAAACTATTCCTTGCGTCAAGCGCAAG 1592 Query 1456129 GCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 || |||||||| | |||||| | | || | || || ||| | ||||| | | Sbjct 1593 GCTGACTGGGCACTCAAGTGGGTATCTGATCAGCG-TTCCAC-CTTCGGTGAGCGCTTGG 1650 Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGG 1456246 ||| ||| || | |||||| |||||||| ||||| || | | |||| ||||||| ||| Sbjct 1651 TCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCTCT-TGCGTCCATCTTCTGG 1709 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGA 1456306 || |||||||| || || ||||| || ||| | || |||||| | ||||| || || Sbjct 1710 CTGAAGAAGCGTGGTCTGATGCCTGGACTTACG-TTCTCCAACGAGCTCATCAGCCGTGA 1768 Query 1456307 CGAAG 1456311 |||| Sbjct 1769 TGAAG 1773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177661699651100