Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq47 120 3e-22 seq16 118 1e-21 >seq47 Length=240645 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || || |||||||| | || || ||| |||| |||| |||||| || Sbjct 28409 GTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGCTTTCCG 28350 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| |||| ||||||||||| | |||| || ||| |||||| ||||| ||| Sbjct 28349 GCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTCGCCTTG 28290 Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | |||| | | ||||| ||| |||||||||| ||||| || |||||||| | || Sbjct 28289 A-CGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTGAGGGT 28231 Query 35719 TTTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 28230 CTTGACGAAGATCTGCAT 28213 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | ||| || |||| ||||||||||| || || || Sbjct 28176 CTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAA 28117 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | ||| | | ||||||||| ||||| ||||| | | Sbjct 28116 AATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTCACATT 28057 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||||| ||||||||| || ||||| | || || || Sbjct 28056 GTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGAC 27997 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 27996 GAAGATCTGCAT 27985 >seq16 Length=421267 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| ||||| || | |||| |||||| || ||||||||||| | | || || |||| Sbjct 332009 CAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACCGTC 332068 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 |||| |||||| || ||||| || | || ||||| || | |||| || |||||||| Sbjct 332069 TTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTGTC 332128 Query 35644 CATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCG 35702 ||| || ||||| |||| | | |||||| |||||||| |||| |||||| | Sbjct 332129 TTGGATTTTCGCCTTCA-CGTTGTCGATGGTGTCGGATGATTCCACTTCCAACGTGATGG 332187 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||||||| | || || ||||| |||||||| Sbjct 332188 TCTTACCCGTGAGGGTCTTGACAAAAATCTGCAT 332221 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || ||||||||||| ||||| ||||| | | || || | || |||| |||||| || Sbjct 331797 GTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGCTTTCCT 331856 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| || || ||||| | ||||| || ||||||||| |||||| |||| Sbjct 331857 GCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTC 331916 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| || |||||||||| ||||| || || ||||| | || Sbjct 331917 ACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTGAGGGTC 331976 Query 35720 TTCACAAATATCTGCAT 35736 || ||||| |||||||| Sbjct 331977 TTAACAAAAATCTGCAT 331993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450784865874000