Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq47 120 3e-22 seq16 107 2e-18 seq4 86.0 6e-12 >seq47 Length=240645 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| ||||||||||||||| || |||| | ||| || Sbjct 28193 ACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCC 28134 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| |||||||| ||||| | |||||||||||||| || || || || || |||||| Sbjct 28133 AGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGA 28074 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| || || ||||| || | || || || || Sbjct 28073 ATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTG 28014 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 28013 CCCGTGAGGGTCTTGACGAAGATCTGCAT 27985 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| ||||| || |||||||||||| || || | ||| ||| Sbjct 27965 ACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCG 27906 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || || | || || ||||| || || ||||| || || || || Sbjct 27905 AGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGG 27846 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| || || ||| | ||||| || || ||||| || | || || || || Sbjct 27845 ATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTG 27786 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 27785 CCCGTGAGGGTCTTGACGAAGATCTGCAT 27757 >seq16 Length=421267 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | |||||||| || ||||||||||| ||||| ||||| || Sbjct 332223 CCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAG 332282 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | ||| || || ||||| || | || || || || || || Sbjct 332283 AGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGA 332342 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || ||||| ||| ||| || ||| | || ||||| || || || Sbjct 332343 ATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACT 332402 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || | || ||||||||||| ||||| Sbjct 332403 TCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 >seq4 Length=631323 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| ||||||||||||||||| ||||||||||||| | Sbjct 303747 CCACCACGGAGACGGAGAACCAAGTGAAGCGTGGATTCCTTTTGGATGTTGTAGTCGCTA 303688 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || ||||| || || || || |||| ||||||||| ||||| || Sbjct 303687 AGAGTACGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 303628 Query 134607 AT 134608 || Sbjct 303627 AT 303626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505388607906000