Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq14 172 8e-38 seq1189 147 3e-30 seq272 114 2e-20 seq78 93.3 6e-14 seq22 87.8 2e-12 >seq14 Length=427353 Score = 172 bits (190), Expect = 8e-38 Identities = 364/539 (68%), Gaps = 12/539 (2%) Strand=Plus/Minus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 ||||| || | ||| || | ||| || || || ||||| || ||||||| ||||||||| Sbjct 84069 CCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAGCCCCGGCATTAATCCACGCTTT 84010 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 |||||||| ||||| | ||||| || || |||||||| || || || ||||| ||||| Sbjct 84009 TTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAATATACCCTCGACTGCAGCAAAG 83950 Query 39758 GCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATGTATCCACTTCTGT---GCCCAA 39811 ||||| || | | | ||| || || | |||||| || || ||||| Sbjct 83949 GCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGATATCCA--TC-GTAACGCCCAG 83893 Query 39812 TCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCA 39871 || ||||| ||| || || || || ||||| |||| ||| ||||| || ||| Sbjct 83892 TCTGCTTTTCGCTTGACGGCCGGTATGGTCTCTATGGCATCAAACAGATACTGGCGCTCA 83833 Query 39872 TCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCA 39931 | || || || ||| || || | || ||| | |||| ||||| |||||| Sbjct 83832 TTGACGTCCTTGACGAGTGTGTCGATAAGGAGCGAATAGGTCTCTGCATGGACATTTTCA 83773 Query 39932 ATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAAT 39991 ||| ||||| || || ||||| |||| ||||| | || || || || |||| Sbjct 83772 ATCATGATCTGGAAACCATAAAAGCATCGAGCTTCTGGGATCTGGACTTCGTTGGAAAAA 83713 Query 39992 CTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGT 40051 | || ||| |||||| || ||||| |||||| || |||||||| || || | |||| Sbjct 83712 CGCTCAACCAGATTTTCGTTAACTATGCCATCAGACGCAGCAAAAAAAGCTAAAATATGT 83653 Query 40052 TTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCATTGATATCTTTTGAT 40108 || || | ||||| | || | | ||||||||| || ||| | || Sbjct 83652 GAGATGAAGTGGCGTTCATTTGCAGTTAGTCGGGTATTCCAGTGCACAATGTCTGTCGAG 83593 Query 40109 ATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167 | ||| | |||||| || |||||||| || ||||| || || ||||||| |||||| || Sbjct 83592 AGATCCATTTCTTCGGCAGTCCAAAAAGATGCCTCCGCTTTCTTGTACAAGTTCCAGAT 83534 Score = 150 bits (166), Expect = 2e-31 Identities = 360/542 (66%), Gaps = 18/542 (3%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 |||||||| | || || | ||||| || || || ||||||||||| ||||||||||| Sbjct 81677 CCCTCATCACGGCTGATGAGCTCGTTGGAGAACGTAAGTCCAGGCATCAGACCACGCTTC 81736 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 || | ||| || || | ||||| || ||||| |||||||||||||| || || || || Sbjct 81737 TTCAACCAGAAGATAGACGCAAAGGAACCAGAGAAGAAGATGCCTTCGACGGCAGCGAAG 81796 Query 39758 GCAACAAGTCTCTCTCCGTAACTTGTA---TCATTATGTATCCACTTCTGTGCCCAATCA 39814 || || | | ||| || | | | | | || | ||||||||| ||||||| ||| Sbjct 81797 GCGACCAAGCGCTCACCAAATGTGGAACGCTGATCAGATATCCACTTGAGTGCCCAGTCA 81856 Query 39815 GCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCA 39874 || || ||| || ||||| || ||||| || || | |||||| || | | | Sbjct 81857 GCCTTGCGCTTGACGCAAGGAATAGTTTCCATGGCGTCAAAGAGGTATTCGCGCTGGGCG 81916 Query 39875 CTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATC 39934 ||| || | || || || || | || || | || || || ||||| || ||| Sbjct 81917 GAATCCTTGATGTAAGTGTCGATGAGAAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATC 81976 Query 39935 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC--TGAACAAAATC 39992 || || || ||||| || || | ||||||| | || ||||| || | ||| | Sbjct 81977 ATGATTTGGAAGCCGTAGAAGCACCGGGCTTCAGCAGCCTGGACCTCATTGGAGAAA--C 82034 Query 39993 TTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTT 40052 ||| | |||||||| || || ||||| || || || || || | || ||| Sbjct 82035 GTTCAAGGAGGTTTTCATTGACAATGCCATCGGATGCAGCGAAGAAGGCGAGGACGTGTG 82094 Query 40053 TAATAAAATATTTTTCATCGGGTGTCAAT-------TTATTCCAGTCATTGATATCTTTT 40105 || ||||| ||| | ||||| | || ||||||||| || |||||| Sbjct 82095 AAACAAAATGGCGTTC----GTTGTCATTAAGACGGTTCGTCCAGTCATGGACGTCTTTT 82150 Query 40106 GATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCAT 40165 || | ||| | || ||||| ||||| || || || || || || |||||||| | |||| Sbjct 82151 GAGAGATCCATCTCCTCAGCAGTCCAGAATGATGCTTCGGCTTTCTTGTACATTTGCCAT 82210 Query 40166 AT 40167 || Sbjct 82211 AT 82212 >seq1189 Length=1840 Score = 147 bits (162), Expect = 3e-30 Identities = 390/591 (66%), Gaps = 20/591 (3%) Strand=Plus/Minus Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 || ||||| | ||||| || || || || | || ||||| | || || | ||| Sbjct 1810 TGGTTAAAGAGCAAGCAAGCAAAATCGATGTGCATACCTTCATCACGGCTGATGAGCTCG 1751 Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721 || || || || ||||||||||| ||||||||||| || ||||| || |||| |||| | Sbjct 1750 TTGGAGAACGTAAGTCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCAAGA 1691 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT 39781 || ||||| |||||||||||||| || || || || || || | | ||| ||| | | Sbjct 1690 GAACCAGAGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCGAAGGTG 1631 Query 39782 GTA---TCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATT 39838 | | | || | || |||||| ||||||| ||||| || ||| || ||||| || Sbjct 1630 GAACGCTGATCAGATACCCACTTGAGTGCCCAGTCAGCCTTGCGCTTGACGCAAGGAATA 1571 Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898 ||||| || || | |||||| || | | | ||| || | || || || || Sbjct 1570 GTTTCCATGGCGTCAAAGAGGTATTCGCGCT-GGCGGAATCCTTGATGTAAGTGTCGATG 1512 Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958 | || | | || || || ||||| || ||| || || || ||||| || || Sbjct 1511 AGAAGTGAGTTGGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAC 1452 Query 39959 CTTGCTTCAGTAATTTGTACCTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTA 40016 | ||||||| | || ||||| |||| ||| | || | |||||||| || | Sbjct 1451 CGGGCTTCAGCAGCCTGGACCTCATTGAAGAAA--CGCTCAAGGAGGTTTTCATTTACAA 1394 Query 40017 TTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTG 40076 | ||||| || || || || || | || ||| || ||||| ||| | || Sbjct 1393 TGCCATCGGATGCAGCGAAGAAGGCGAGGACGTGTGAAACAAAATGGCGTTC----GTTG 1338 Query 40077 TCAAT-------TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTC 40129 ||| | || ||||||||| ||| |||||||| | || | || ||||| ||| Sbjct 1337 TCATTAAGACGGTTCGTCCAGTCATGGATGTCTTTTGAGAGCTCCATCTCCTCAGCAGTC 1278 Query 40130 CAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGT 40180 || || || || || || || | |||||| | |||||| | | ||| |||| Sbjct 1277 CAGAATGATGCTTCGGCTTTCTCGTACATTTGCCATATCTGATGAT-TTGT 1228 >seq272 Length=43472 Score = 114 bits (126), Expect = 2e-20 Identities = 162/227 (71%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 || ||||| | || || | ||||| || || || |||||||||| ||||||| ||| Sbjct 3714 CCTTCATCACGGCTGATGAGCTCGTTGGAGAACGTAGGTCCAGGCATCAGACCACACTTC 3773 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 || ||||| || |||| |||||||| | ||| |||||||||||||| || || || || Sbjct 3774 TTCAGCCAGAAGATGGACGCAAAAGAACTAGAGAAGAAGATGCCTTCGACGGCAGCGAAG 3833 Query 39758 GCAACAAGTCTCTCTCCGTAACTTGTA---TCATTATGTATCCACTTCTGTGCCCAATCA 39814 || || | | ||| || | | | | | || | ||||||||| ||||||| ||| Sbjct 3834 GCGACCAAGCGCTCACCAAAGGTGGAACGCTGATCAGATATCCACTTGAGTGCCCAGTCA 3893 Query 39815 GCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 || || ||| || ||||| || |||| || || | |||||| || Sbjct 3894 GCCTTGCACTTGACGCAAGGAATACTTTCCATGGCGTCAAAGAGGTA 3940 >seq78 Length=184271 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 69669 AttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 69728 |||||| | || ||||| || || | || |||| ||||||||||| || || ||||| Sbjct 133880 ATTTTTCCTCAGGTCGAGGAAATCAAATATGTCAGGGTGCCATGGTTCAAGGTAAATCGC 133939 Query 69729 CATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGAC 69788 | |||||||||| || || || || ||||| | || | || ||| || ||| | Sbjct 133940 AAAAGCTCCCGGTCGCTTGTTGCCACCTTGATCGACATAGCGTGCTGTGGCATCATACGC 133999 Query 69789 TCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839 | ||||| |||| |||||| ||||| | || |||||||||| ||| || Sbjct 134000 ACGAAGCATGGGAACAATACCGTTAGAGTAGCCGTTTGTTCCAGCAATGTA 134050 >seq22 Length=397055 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||| || || || |||||||||| ||||||||||| || ||||| || |||| ||| Sbjct 301423 TCGTTGGAGAACGTACGTCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCA 301364 Query 39719 AAAGATCCAGAAAAGAAGATGCC 39741 ||||| ||||| ||||||||||| Sbjct 301363 AAAGAACCAGAGAAGAAGATGCC 301341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686895491142000