Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14 129 7e-25 seq78 102 1e-16 seq65 102 1e-16 seq1189 95.1 1e-14 seq272 82.4 9e-11 >seq14 Length=427353 Score = 129 bits (142), Expect = 7e-25 Identities = 354/529 (67%), Gaps = 25/529 (5%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497 ||||||||||| ||| | ||||||||||| || | | || |||| || ||| ||| Sbjct 82176 TGGACTGCTGAGGAGATGGATCTCTCAAAAGACGTCCATGACTGGACGAACCGTCTTAAT 82117 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || || ||| | || | | || |||| || ||||| |||| ||||||||| ||| Sbjct 82116 GACAACGAACGCCATTTTGTTTCACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATT 82057 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTG--ATGAGGTGCAATCCTCTGAAGCGAGAT 94615 || ||| || || | | || || || ||||||| || | ||||||| | | Sbjct 82056 GTCAATGAAAACCTCCTTGA--ACGTTTCTCCAATGAGGTCCAGGCTGCTGAAGCCCGGT 81999 Query 94616 CCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 94674 |||||| | | || |||| ||| | | | || ||||| ||| ||| Sbjct 81998 GCTTCTACGGCTTCCAAA-TCATGATGGAGAACATTCACTCCGAGACCTACTCGCTTCTC 81940 Query 94675 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 94734 || |||| || || |||||| || || | | |||||||| ||||| |||| Sbjct 81939 ATCGACACTTACATCAAGGATTCCGCCCAGCGCGAATACCTCTTTGACGCCATGGAAACT 81880 Query 94735 GTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 94790 |||| || | ||| | ||| | || ||||| | |||||| | |||| || Sbjct 81879 ATTCCTTGCGT-CAAGCGCAAGGCTGACTGGGCACTCAAGTGGATATCTGAT-CA----- 81827 Query 94791 GCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 94847 ||||||| |||| |||||| | |||| || || || || || ||||||||||| Sbjct 81826 GCGTTCCACATTTGGTGAGCGCTTGGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTC 81767 Query 94848 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 94906 ||||||||| |||| |||| | ||| | |||||||| ||||| ||||| || || | Sbjct 81766 TGGTTCCTT-TGCGTCTATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGACTTACGT 81708 Query 94907 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||||| ||| ||||| ||||| | ||| || ||||| Sbjct 81707 TCTCCAACGAGCTCATCAGCCGTGATGAGGGTATGCACACCGATTTTGC 81659 >seq78 Length=184271 Score = 102 bits (112), Expect = 1e-16 Identities = 284/433 (66%), Gaps = 11/433 (3%) Strand=Plus/Minus Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025 || |||||||| ||||| |||||| ||||| | || || |||||| | || | Sbjct 133489 AACCAAAAGAACTTGGGCACCATCAAGTCGTCCAACTTGTGCACTGAAATCATAGAGTAC 133430 Query 105026 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--ATG 105083 | ||| || || ||||| ||||| || ||||| |||| ||||| | | || Sbjct 133429 TCGTCGCCAGAGGAAACCGCTGTCTGTAATCTTGCATCTCTCGCCCTCCCTACTTTCATT 133370 Query 105084 TGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCA 105143 | || | | ||| || |||| |||| || ||||| |||||||| |||| Sbjct 133369 TCGAAC----GGCAAGTAC----GATTTCCAAAAGCTTCACGATGTTACGAAGGTCGTCA 133318 Query 105144 CCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 105203 || ||||| ||| | | || ||| ||||| || |||||| | ||||| | | Sbjct 133317 CCCGTAACCTCAACCGCATCATCGATGTAAATTACTATCCCGTTCCGGAGGCTCGCACTT 133258 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTC 105263 | || ||| | || || || |||||||| ||||| ||||||||||| |||| || || Sbjct 133257 CCAACATGCGTCATCGCCCCATTGGTCTTGGTGTCCAGGGTCTCGCAGATGCTTTTATGA 133198 Query 105264 TTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGA 105323 || || ||||||| || || || | | || ||||| | || || |||| Sbjct 133197 TTCTCCGTTTGCCATTTGACTCACCTGAGGCAAGGCAACTCAATCTTCAGATCTTCGAGA 133138 Query 105324 CCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATG 105383 |||| ||||| || | || ||||| || | ||| || || ||||| ||||| | Sbjct 133137 CCATCTATCATGCTGGACTCGAGGCTAGCTGCGAGGAAGCTGAAAGAGATGGACCATACG 133078 Query 105384 AAACCTTTGAGGG 105396 | | |||| |||| Sbjct 133077 AGA-CTTTCAGGG 133066 >seq65 Length=183570 Score = 102 bits (112), Expect = 1e-16 Identities = 208/309 (67%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 169201 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 169260 ||| ||||||||||| | ||| || ||||| || | |||| || ||||| Sbjct 91246 ATCTGTCATGATCATCAAACGTCCGTACCGCAGACTGCCGACATTGCTGTACTCCTTGTT 91305 Query 169261 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGT 169320 || || ||||||| |||||||||| || | || |||| ||| ||| ||| Sbjct 91306 GTGCTGGAGACCCATAATCTTCTTGATATTCTGGATTTCTTCGTTCTTCATGATCTGGTC 91365 Query 169321 GACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATC 169380 | || || || || || |||| ||||| || |||||||| ||| | | || Sbjct 91366 GTGCTTCGCTTCCCGGACGTTGAGTAACTTTCCACGGAGTGGGAAGACGCCGAAATTGTC 91425 Query 169381 ACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGAC 169440 ||||||||| || || || || || || | || ||||| |||||||||||||| | Sbjct 91426 ACGACCAACTACACCCAGTCCGGCCACAGCCAAAGCTTTCGCAGAGTCACCCTCGGTTAA 91485 Query 169441 GATGAGCGTACATTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGG 169500 || |||||||| || ||| ||| ||| || || ||||| ||||| | | ||||| Sbjct 91486 AATTAGCGTACACCTTTCAGCGTGTTTCGTGCCTGCGTTGTTTGCATCGGCGAGTTTGGT 91545 Query 169501 AATACCAGT 169509 || ||||| Sbjct 91546 CATTCCAGT 91554 >seq1189 Length=1840 Score = 95.1 bits (104), Expect = 1e-14 Identities = 347/529 (66%), Gaps = 26/529 (5%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497 ||||||||||| ||| | || |||||||| || | | || |||| || ||| ||| Sbjct 1276 TGGACTGCTGAGGAGATGGAGCTCTCAAAAGACATCCATGACTGGACGAACCGTCTTAAT 1335 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || || ||| | || | | || |||| || ||||| |||| ||||||||| ||| Sbjct 1336 GACAACGAACGCCATTTTGTTTCACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATT 1395 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTG--ATGAGGTGCAATCCTCTGAAGCGAGAT 94615 || ||| || || | | | || || ||||||| || | ||||||| | | Sbjct 1396 GTAAATGAAAACCTCCTTGAG--CGTTTCTTCAATGAGGTCCAGGCTGCTGAAGCCCGGT 1453 Query 94616 CCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 94674 |||||| | | || |||| ||| | | | || ||||| || ||| Sbjct 1454 GCTTCTACGGCTTCCAAA-TCATGATGGAGAACATTCACTCCGAGACCAACTCACTTCTC 1512 Query 94675 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 94734 || |||| || || |||||| || ||| | |||||||| ||||| |||| Sbjct 1513 ATCGACACTTACATCAAGGATTCCGCCAGCGCGAAT-ACCTCTTTGACGCCATGGAAACT 1571 Query 94735 GTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 94790 |||| || | ||| | ||| | || ||||| | |||||| | |||| || Sbjct 1572 ATTCCTTGCGT-CAAGCGCAAGGCTGACTGGGCACTCAAGTGGGTATCTGAT-CA----- 1624 Query 94791 GCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 94847 ||||||| || | |||||| | |||| || || || || || ||||||||||| Sbjct 1625 GCGTTCCACCTTCGGTGAGCGCTTGGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTC 1684 Query 94848 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 94906 |||||| | |||| | || | ||||| |||||||| ||||| ||||| || || | Sbjct 1685 TGGTTCTCT-TGCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGACTTACGT 1743 Query 94907 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||||| ||| ||||| || || | ||| || ||||| Sbjct 1744 TCTCCAACGAGCTCATCAGCCGTGATGAAGGTATGCACATCGATTTTGC 1792 >seq272 Length=43472 Score = 82.4 bits (90), Expect = 9e-11 Identities = 175/251 (70%), Gaps = 18/251 (7%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGAA 94772 |||||||| ||||| ||| |||| || | ||| | ||| | || ||||| | || Sbjct 3937 CTCTTTGACGCCATGGAAAGTATTCCTTGCGT-CAAGTGCAAGGCTGACTGGGCACTCAA 3879 Query 94773 GTGGTT---TGATACAAAGTCGCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTG 94826 |||| | |||| || ||||||| |||| |||||| | |||| || || Sbjct 3878 GTGGATATCTGAT-CA-----GCGTTCCACCTTTGGTGAGCGCTTGGTCGCCTTCGCTGC 3825 Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAG 94885 || || || |||||||||||| |||| || |||| | || | ||||| |||||| | | Sbjct 3824 CGTCGAAGGCATCTTCTTCTCTAGTTCTTT-TGCGTCCATCTTCTGGCTGAAGAAGTGTG 3766 Query 94886 GTCTCATGCCAGGTCTCTGC-TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||| || | || | |||||||||||||| ||| ||||| || || | ||| Sbjct 3765 GTCTGATGCCTGGAC-CTACGTTCTCCAACGAGCTCATCAGCCGTGATGAAGGTATGCAC 3707 Query 94945 CAAGAGTTTGC 94955 || ||||| Sbjct 3706 ATCGATTTTGC 3696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583249499322000