Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq78 127 2e-24 seq14 111 2e-19 >seq78 Length=184271 Score = 127 bits (140), Expect = 2e-24 Identities = 211/300 (70%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 78858 GAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCAT 78917 ||| ||||| || |||| || || |||||||| || | | | || || || || ||||| Sbjct 133193 GAGAATCATAAAAGCATCTGCGAGACCCTGGACACCAAGACCAATGGGGCGATGACGCAT 133252 Query 78918 GTTGCTCTTTCGGGCCGCCTCGGTCGGG-TAAAAGTTCCGATCGATGACGCGGTTCAGGT 78976 |||| | || ||| || | |||| || | || |||||||| |||||| |||| Sbjct 133253 GTTGGAAGTGCGAGCCTCCG-GAACGGGATAGTAATTTACATCGATGATGCGGTTGAGGT 133311 Query 78977 TACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTGA 79036 |||| ||||||||| || || |||| | || |||||| | | | | || || Sbjct 133312 TACGGGTGACGACCTTCGTAACATCGTGAAGCTTTTGGAAATCGTACT--TGCCGTTCGA 133369 Query 79037 --TGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGA 79094 ||||||| || ||| || ||||| || || || || || || || || || || Sbjct 133370 AATGAAAGTAGGGAGGGCGAGAGATGCAAGATTACAGACAGCGGTTTCCTCTGGCGACGA 133429 Query 79095 AACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTT 79154 ||| |||||||| |||||||| || ||||||||||||||||| | |||||| ||||| Sbjct 133430 GTACTCTATGATTTCAGTGCACAAGTTGGACGACTTGATGGTGCCCAAGTTCTTTTGGTT 133489 Score = 114 bits (126), Expect = 1e-20 Identities = 212/306 (69%), Gaps = 4/306 (1%) Strand=Plus/Minus Query 19843 CAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCAT 19902 ||| || || || |||||| | ||| | ||||||||||||||| |||| ||||||||||| Sbjct 133496 CAAATCGAACCAAAAGAACTTGGGCACCATCAAGTCGTCCAACTTGTGCACTGAAATCAT 133437 Query 19903 GGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCGAC 19962 ||| || ||| || || || || || |||||||| || || || ||| || || Sbjct 133436 AGAGTACTCGTCGCCAGAGGAAACCGCTGTCTGTAATCTTGCATCTCTCGCCCTCCCTAC 133377 Query 19963 TTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAA-TTGTACGAGGTGACCCGGGTCGTCA 20021 |||| | | | | | ||| ||| | ||| | |||| || || |||||||| Sbjct 133376 TTTCATTTCGAACGGCAAGTACGA-TTTCCAAAAGCTTCACGATGTTACGAAGGTCGTCA 133318 Query 20022 CGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCGACCGAGGCGGCGCGCAAG 20080 | ||||| || || ||| |||||||| || | || |||| | || ||| |||| Sbjct 133317 CCCGTAACCTCAACCGCATCATCGATGTAAATTACTATCCCGTTC-CGGAGGCTCGCACT 133259 Query 20081 TCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATG 20140 || || ||||| || || || || | | || |||||||| || || || | ||| ||| Sbjct 133258 TCCAACATGCGTCATCGCCCCATTGGTCTTGGTGTCCAGGGTCTCGCAGATGCTTTTATG 133199 Query 20141 ATGCTC 20146 || ||| Sbjct 133198 ATTCTC 133193 >seq14 Length=427353 Score = 111 bits (122), Expect = 2e-19 Identities = 277/412 (67%), Gaps = 13/412 (3%) Strand=Plus/Plus Query 59709 GCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAAC--TTTTCCA 59766 || || || || ||| |||||| || || | |||||| | | ||| | ||||||| Sbjct 83663 GCTTTTTTTGCTGCGTCTGATGGCATAGTTAACGAAAATCTGGT--TGAGCGTTTTTCCA 83720 Query 59767 AGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTA 59826 | || |||||||| | || || || | || || | | ||| | | || | Sbjct 83721 ACGAAGTCCAGATCCCAGAAGCTCGATGCTTTTATGGTTTCCAGATCATGATTGAAAATG 83780 Query 59827 TCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGG 59886 |||| | ||||| || |||||| | ||||| | | |||||||| || | || | Sbjct 83781 TCCATGCAGAGACCTATTCGCTCCTTATCGACACACTCGTCAAGGA--CGTCAATGAGCG 83838 Query 59887 CTGGT--CTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGC 59944 | || ||||| |||||||||||| || || || || | ||||||||| ||||| Sbjct 83839 CCAGTATCTGTTTGATGCCATAGAGACCATACCGGCCGTCAAGCGAAAAGCAGACTGGGC 83898 Query 59945 CATGCAGTGGATGAGT--CCTGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATG 60001 | | ||||| | | |||| || ||||||| || || | || ||||| || Sbjct 83899 GTTACGATGGATATCTGACAAGGAGGCAACATTTGCCACTCGGCTAGTTGCCTTTGC-TG 83957 Query 60002 C-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTG 60060 | || || || || ||||| || |||||||| | || ||||||||||||||||||| Sbjct 83958 CAGTCGAGGGTATATTCTTTTCCGGCTCGTTTGCATCAATATTCTGGCTCAAAAAGCGTG 84017 Query 60061 GCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 | | |||||||| || | ||||||||| || || || || |||||||| Sbjct 84018 GATTAATGCCGGGGCTCACTTTCTCCAATGAACTCATCAGTCGTGACGAGGG 84069 Score = 102 bits (112), Expect = 9e-17 Identities = 347/531 (65%), Gaps = 16/531 (3%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| |||||||| | ||||||||| | | |||||||| || ||| | |||| Sbjct 82202 TGTACAAGAAAGCCGAAGCATCATTCTGGACTGCTGAGGAGATGGATCTCTCAAAAGACG 82143 Query 59653 TGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGG 59709 | | || ||| || | | ||| || |||| | ||||| | ||||| | Sbjct 82142 TCCATGACTGGACGAACCGTCTTAATGACAACGAACGCCATTTTGTTTCACACGTCCTCG 82083 Query 59710 CCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTC--CAA 59767 |||||||||| || ||||| ||||| | ||||| | | ||||| |||| ||| Sbjct 82082 CCTTCTTCGCTGCATCCGATGGCATTGTCAATGAAAACCTC--CTTGAACGTTTCTCCAA 82025 Query 59768 GGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTAT 59827 || |||||| ||| || ||||||| ||||||| | || | | ||| || Sbjct 82024 TGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATCATGATGGAGAACAT 81965 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 ||||||||||| |||||||| | ||||| | | |||||||| | | || | Sbjct 81964 TCACTCCGAGACCTACTCGCTTCTCATCGACACTTACATCAAGGATTCCGCCCAGCGCGA 81905 Query 59888 TGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946 || || ||||| || || | || || || || | || || || ||||| Sbjct 81904 ATACCTCTTTGACGCCATGGAAACTATTCCTTGC-GTCAAGCGCAAGGCTGACTGGGCAC 81846 Query 59947 TGCAGTGGATGAGTCCTGGAGCAT----CATTTGCACAACGTCTCATAGCTTTTGCATGC 60002 | ||||||| | | ||| | |||||| | || | | || || || | Sbjct 81845 TCAAGTGGATATCTGATC-AGCGTTCCACATTTGGTGAGCGCTTGGTCGCCTTCGCTGCC 81787 Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-CTATTTTCTGGCTCAAAAAGCGTGG 60061 || ||||| |||||||||||||| || || || | |||| |||||| | || |||||||| Sbjct 81786 GTCGAAGGCATCTTCTTCTCTGGTTCCTT-TGCGTCTATCTTCTGGTTGAAGAAGCGTGG 81728 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 || ||||| || || | |||||||||||||| || ||| || ||||| Sbjct 81727 TCTGATGCCTGGACTTACGTTCTCCAACGAGCTCATCAGCCGTGATGAGGG 81677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548514172332000