Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq14 150 2e-31 seq1189 132 5e-26 seq272 109 6e-19 seq30 100 3e-16 seq65 91.5 2e-13 >seq14 Length=427353 Score = 150 bits (166), Expect = 2e-31 Identities = 344/508 (68%), Gaps = 16/508 (3%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || ||||| | ||| || | || || || |||| ||| |||||||| || ||||||||| Sbjct 81677 CCCTCATCACGGCTGATGAGCTCGTTGGAGAACGTAAGTCCAGGCATCAGACCACGCTTC 81736 Query 74829 TTCAACCAAAAGAT-GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 |||||||| ||||| | | || ||||||||| |||||||||||||||||| || || Sbjct 81737 TTCAACCAGAAGATAGACGCA-AAGGAACCAGAGAAGAAGATGCCTTCGACGGCAGCGAA 81795 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCG--GA--AGTCATCCAAGTCTGAGCCCATT 74943 |||||| | ||| | | | || ||| | || || || ||||| | | ||||| | Sbjct 81796 GGCGACCAAGCGCT-CACCAAATGTGGAACGCTGATCAGATATCCACTTGAGTGCCCAGT 81854 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTT 75003 |||| || || ||||| ||| | ||| || || || | |||||| | | || Sbjct 81855 CAGCCTTGCGCTTGACGCAAGGAATAGTTTCCATGGCGTCAAAGAGGTATTCGCGCTGGG 81914 Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063 ||| |||||||| | |||| || | ||| ||||| ||||| || ||||| ||| Sbjct 81915 CGGAATCCTTGATGTAAGTGTCGATGAGAAGCGAGTAGGTCTCGGAGTGAATGTTCTCCA 81974 Query 75064 TGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAA- 75122 | | ||| | ||||||| |||| || || ||| ||| || || || || ||| Sbjct 81975 TCATGATTTGGAAGCCGTAGAAGCACCGGGCTTCAGCAGCCTGGACCTCATTGGAGAAAC 82034 Query 75123 -TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCAT 75181 |||| | || || || |||| ||||| || || || ||||| || || || || Sbjct 82035 GTTCAAG--GAGGTTTTCATTGACAATGCCATCGGATGCAGCGAAGAAGGCGAGGACGTG 82092 Query 75182 TTTGATAAAGTGGCGCTCATCGTCAGTGA----GTTTGTCCCAATCCTTCAGGTCCCCCG 75237 | | ||| ||||| || | |||| | | ||| || ||| || | | ||| | Sbjct 82093 TGAAACAAAATGGCGTTCGTTGTCATTAAGACGGTTCGT-CCAGTCATGGACGTCTTTTG 82151 Query 75238 CCAAATCAATCTCCTCGACCGTCCAGAA 75265 | ||| |||||||| | |||||||| Sbjct 82152 AGAGATCCATCTCCTCAGCAGTCCAGAA 82179 >seq1189 Length=1840 Score = 132 bits (146), Expect = 5e-26 Identities = 302/445 (68%), Gaps = 12/445 (3%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 |||||||| | ||| || | || || || |||| ||| |||||||| || ||||||||| Sbjct 1774 CCTTCATCACGGCTGATGAGCTCGTTGGAGAACGTAAGTCCAGGCATCAGACCACGCTTC 1715 Query 74829 TTCAACCAAAAGATGGCACAGAAG-GAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 |||| ||| ||||||| || ||| |||||| |||||||||||||||||| || || Sbjct 1714 TTCAGCCAGAAGATGG-ACGCAAGAGAACCAGAGAAGAAGATGCCTTCGACGGCAGCGAA 1656 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCG--GA--AGTCATCCAAGTCTGAGCCCATT 74943 |||||| | ||| | |||| |||| | || || || | ||| | | ||||| | Sbjct 1655 GGCGACCAAGCGCTCACCGAA-GGTGGAACGCTGATCAGATACCCACTTGAGTGCCCAGT 1597 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTT 75003 |||| || || ||||| ||| | ||| || || || | |||||| | | || Sbjct 1596 CAGCCTTGCGCTTGACGCAAGGAATAGTTTCCATGGCGTCAAAGAGGTATTCGCGCT-GG 1538 Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063 ||| |||||||| | |||| || | |||||||| ||||| || ||||| ||| Sbjct 1537 CGGAATCCTTGATGTAAGTGTCGATGAGAAGTGAGTTGGTCTCGGAGTGAATGTTCTCCA 1478 Query 75064 TGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAA 75121 | | ||| | ||||||| |||| || || ||| ||| || || || |||| Sbjct 1477 TCATGATTTGGAAGCCGTAGAAGCACCGGGCTTCAGCAGCCTGGACCTCATTGAAGAAAC 1418 Query 75122 ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCAT 75181 ||| | || || || | || ||||| || || || ||||| || || || || Sbjct 1417 GCTCAAG--GAGGTTTTCATTTACAATGCCATCGGATGCAGCGAAGAAGGCGAGGACGTG 1360 Query 75182 TTTGATAAAGTGGCGCTCATCGTCA 75206 | | ||| ||||| || | |||| Sbjct 1359 TGAAACAAAATGGCGTTCGTTGTCA 1335 >seq272 Length=43472 Score = 109 bits (120), Expect = 6e-19 Identities = 207/297 (70%), Gaps = 12/297 (4%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 |||||||| | ||| || | || || || |||| | | |||||||| || |||| |||| Sbjct 3714 CCTTCATCACGGCTGATGAGCTCGTTGGAGAACGTAGGTCCAGGCATCAGACCACACTTC 3773 Query 74829 TTCAACCAAAAGATGG-CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 |||| ||| ||||||| | || ||| ||| | |||||||||||||||||| || || Sbjct 3774 TTCAGCCAGAAGATGGACGCAAAAG-AACTAGAGAAGAAGATGCCTTCGACGGCAGCGAA 3832 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCG--GA--AGTCATCCAAGTCTGAGCCCATT 74943 |||||| | ||| | | | || |||| | || || || ||||| | | ||||| | Sbjct 3833 GGCGACCAAGCGCT-CACCAAAGGTGGAACGCTGATCAGATATCCACTTGAGTGCCCAGT 3891 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTT 75003 |||| || | ||||| ||| | | | || || || | |||||| | | || Sbjct 3892 CAGCCTTGCACTTGACGCAAGGAATACTTTCCATGGCGTCAAAGAGGTATTCGCGCTGGG 3951 Query 75004 CGGGATCCTTGACG--AG---CTTGTCAATCATAAGTGAGTACGTCTCCGAATGAAT 75055 ||| |||||||| | || | |||| || | ||||||||| ||||| || |||| Sbjct 3952 CGGAATCCTTGATGTAAGTGTCGTGTCGATGAGAAGTGAGTAGGTCTCGGAGCGAAT 4008 >seq30 Length=312077 Score = 100 bits (110), Expect = 3e-16 Identities = 223/328 (68%), Gaps = 14/328 (4%) Strand=Plus/Minus Query 124712 CTCGTGGTTGAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTT 124771 |||||| ||||| || || || | |||||| |||| ||||||| |||||||||||| Sbjct 95635 CTCGTGATTGAATAGGATACCGTTGCACGCATACATGCCGTACGCCTCGCGGTAGTTCAC 95576 Query 124772 CGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGT 124831 ||| ||||| || | | | ||||| || ||||| ||||| || |||||||| || || Sbjct 95575 CGTGATCCAGTATGCGTACAACTTGGCGACACCATATGGGCTACGAGGGTAGAACGGCGT 95516 Query 124832 GTTTTCATTTTGGGTAGGTTGCTGA--ATCTTCCCAAACATCTCCGAAGTACCCGCCTGA 124889 | | || | || | |||| | || | ||| ||| | | || || || ||||| Sbjct 95515 GGTCTCGCTCTGTG-GGGTTTC-GACGACCTTTCCATAGAGTTCTGAGGTCGAAGCCTGG 95458 Query 124890 TAGAA-----TTTGAATTTTGAAATAGAATTCGTTTGACGAATTGCCTCCAAGATCCGAA 124944 ||||| | || |||| || || || | || || || || | || || | Sbjct 95457 TAGAACCGCGTGTG-TTTTTCAAGGCCAA--CGGT--GCGGATGGCGTCAAGGAGACGCA 95403 Query 124945 GGGTTCCCATGGCGTCCACATTGGCGGTATACTCGGGCTGATCAAAAGACAGTTTCACAT 125004 |||| || | | | || |||| ||||||||| || | | ||||| |||| || || | Sbjct 95402 GGGTGCCGACGCCATCAACATCGGCGGTATATTCTGACATCTCAAAGGACACCTTGACGT 95343 Query 125005 GGGACTGGGCACCTAGGTTGTACACCTC 125032 | || || ||||| |||||||| | ||| Sbjct 95342 GCGATTGAGCACCAAGGTTGTAGATCTC 95315 >seq65 Length=183570 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 152938 GCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCT 152997 || ||||| || ||| | |||||| |||||||| || |||||||| || || || Sbjct 91373 GCTTCCCGGACGTTGAGTAACTTTCCACGGAGTGGGAAGACGCCGAAATTGTCACGACCA 91432 Query 152998 ACAACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGC 153057 || || | ||| ||||| | ||| | |||||||| |||||||||||||| | ||| ||| Sbjct 91433 ACTACACCCAGTCCGGCCACAGCCAAAGCTTTCGCAGAGTCACCCTCGGTTAAAATTAGC 91492 Query 153058 GTACA 153062 ||||| Sbjct 91493 GTACA 91497 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 118172 GCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCC 118231 || ||||| |||||| | ||| || || ||||| || ||||| || |||||||| || Sbjct 91373 GCTTCCCGGACGTTGAGTAACTTTCCACGGAGTGGGAAGACGCCGAAATTGTCACGACCA 91432 Query 118232 ACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGA 118291 || || | || ||||| | ||| | || ||||| |||||||||||||| | ||| || Sbjct 91433 ACTACACCCAGTCCGGCCACAGCCAAAGCTTTCGCAGAGTCACCCTCGGTTAAAATTAGC 91492 Query 118292 GTGCAC 118297 || ||| Sbjct 91493 GTACAC 91498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547205397690000