Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq47 152 6e-32 seq16 152 6e-32 seq60 100 3e-16 seq4 93.3 5e-14 seq35 84.2 2e-11 seq14 84.2 2e-11 >seq47 Length=240645 Score = 152 bits (168), Expect = 6e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || | ||||| ||||| Sbjct 28213 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACAATCACATTGGAGGTGGAGTCGTCA 28272 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || ||||||||||| ||||| ||||| ||||||||| Sbjct 28273 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAAGAGGGCATTCCACCAGACCAG 28332 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| | ||||| | || || || | || || ||| Sbjct 28333 CAGCGTCTGATCTTTGCCGGAAAGCAGTTGGAGGACGGGCGCACGCTGTCGGATTACAAT 28392 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGAC 27634 |||| ||||| ||| ||||| || || | |||||||| ||||||| Sbjct 28393 ATCCAGAAGGAGAGCACCCTTCACCTTGTACTCCGTCTTCGTGGTGGAC 28441 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || | || || |||||| | Sbjct 27757 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAAGTGGAGTCATCT 27816 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || |||||||||||||| ||||| || || || Sbjct 27817 GACACCATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAA 27876 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || || ||||| ||||| ||||| || | ||||| || | ||||| || Sbjct 27877 CAACGACTCATCTTCGCTGGCAAGCAGCTCGAAGACGGACGTACTCTTTCCGACTACAAC 27936 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || | |||||||| || || Sbjct 27937 ATCCAGAAGGAGTCCACACTCCACCTTGTTCTCCGTCTTCGTGGCGG 27983 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || | ||||| ||||| | Sbjct 27985 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAGGTGGAGTCTTCT 28044 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || ||||| ||||||||||| || ||||| || ||| Sbjct 28045 GACACTATCGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCCGATCAG 28104 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| || || || | || ||||| | ||||| || Sbjct 28105 CAGCGCCTCATTTTCGCAGGCAAGCAGCTGGAAGACGGCCGCACCCTTTCCGACTACAAC 28164 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || | |||||||| || || Sbjct 28165 ATTCAGAAGGAGTCTACCCTCCACCTTGTTCTCCGTCTTCGTGGCGG 28211 Score = 113 bits (124), Expect = 5e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 ||||| || |||||||||||||| ||||||||||| ||||| |||||||||| |||||| Sbjct 27634 ATTCCACCTGACCAGCAGCGTCTCATTTTTGCTGGCAAGCAGCTCGAGGATGGTCGTACA 27693 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | ||||| || |||| ||||| || || ||||| | ||| ||||||| || || Sbjct 27694 CTCTCCGACTACAACATCCAGAAGGAGTCTACCCTTCACTTGGTCCTGCGTCTCCGTGGA 27753 Query 27631 GG 27632 || Sbjct 27754 GG 27755 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || |||||||| ||||||||||| || ||||||||||| ||||| Sbjct 27476 AATGCAGATTTTCGTTAAGACGCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTC 27535 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 ||||| ||| | || | ||||| || || || ||||||||||| Sbjct 27536 TGATACCATCGATAACGTCAAGGCCAAGATCCAAGACAAGGAGGG 27580 >seq16 Length=421267 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || || || ||||| || ||| | ||||| |||||| Sbjct 331993 ATGCAGATTTTTGTTAAGACCCTCACGGGGAAGACCATCACTTTGGAGGTGGAGTCATCC 331934 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || |||||||||||||| || |||||||| ||||| Sbjct 331933 GACACTATCGACAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAA 331874 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || || || || ||||| | || |||| |||||| || | || ||||| Sbjct 331873 CAACGCCTGATCTTCGCAGGAAAGCAGTTGGAAGATGGTCGTACGCTCTCTGATTATAAC 331814 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||| ||||| || || | |||||||| ||||| Sbjct 331813 ATCCAAAAGGAGAGCACCCTTCACCTTGTTCTTCGTCTTCGTGGTGG 331767 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || || || ||||| || || | || || || ||| Sbjct 332221 ATGCAGATTTTTGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAAGTGGAATCATCC 332162 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| ||||| || |||||||| || ||||| || || ||| Sbjct 332161 GACACCATCGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGCATTCCCCCTGATCAG 332102 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || |||||||| ||||| | || || | ||| || || | || || || Sbjct 332101 CAACGCCTTATCTTTGCTGGAAAGCAGTTGGAAGACGGTCGCACGCTTTCGGATTACAAC 332042 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| | ||||||||||||||||| || Sbjct 332041 ATCCAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTTCGCGGAGG 331995 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || || ||||| || || | || || ||||| Sbjct 332449 ATGCAGATTTTCGTTAAGACCCTCACGGGGAAGACCATCACGTTGGAAGTAGAGTCCTCC 332390 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || |||| || || |||||||||||||| || |||||||| ||||| Sbjct 332389 GATACCATCGACAACGTGAAAGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAA 332330 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || ||||| || ||||| | || || | || || || |||| || ||| Sbjct 332329 CAACGCCTCATCTTTGCCGGAAAGCAGTTGGAAGACGGCCGCACACTCTCAGATTACAAT 332270 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||||||||| ||||| || || | ||||| || || || Sbjct 332269 ATTCAGAAGGAATCCACCCTTCACCTCGTTCTACGTCTCCGTGGAGG 332223 >seq60 Length=206367 Score = 100 bits (110), Expect = 3e-16 Identities = 215/325 (66%), Gaps = 6/325 (2%) Strand=Plus/Plus Query 24584 CGAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCGTTTGACCAACCCGAGTA 24643 |||| ||||||||||||| ||||| || |||||||| | || || || | || || Sbjct 28456 CGAGATCTATAACCTAGGCGCCCAATCTCACGTCAAAGTCTCATTCGAGATGTCAGAATA 28515 Query 24644 CACGGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNNNN 24703 ||| ||| | || |||| || || ||||| | | || || ||||| ||| Sbjct 28516 CACAGCCGATGTAGATGGGCTCGGTACCCTCCGCCTCCTCGACGCAATCCGCACAGTAGG 28575 Query 24704 NNNNNNNTTGAAATTC---AGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGT 24760 |||| | || || || || ||| || || | | ||| ||||| Sbjct 28576 GCTCGA---GAAACACGCCAGGTTCTACCAAGCGTCCACTTCAGAACTATATGGAAAGGT 28632 Query 24761 GCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTC 24820 |||||||| ||| || || ||||| || ||||| || ||||| || || ||| | Sbjct 28633 TGTCGAGACGCCCCAGAGCGAAACAACTCCGTTCTATCCTCGCAGCCCTTACGGTGTCGC 28692 Query 24821 AAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATG 24880 || | | ||||| ||||| || ||| ||||||||||| |||| || ||||| || Sbjct 28693 CAAACTTTATGCGTATTGGATCACAGTGAATTACCGTGAGGCATATGGCATGTATGCGTG 28752 Query 24881 CAACGGAATTCTGTTCAACCATGAG 24905 ||||| || ||||||| |||||| Sbjct 28753 TAACGGGATCTTGTTCAATCATGAG 28777 >seq4 Length=631323 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC- 27569 || || || |||||||||||||| || || ||||| ||||| || ||||| | ||||| Sbjct 303626 ATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGTACT 303685 Query 27570 CCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 | |||| ||||| || |||||||||||||||| ||||| | || | ||||| || || Sbjct 303686 CTTAGC-GACTACAACATCCAAAAGGAATCCACGCTTCACTTGGTTCTCCGTCTCCGTGG 303744 Query 27630 TGG 27632 ||| Sbjct 303745 TGG 303747 >seq35 Length=287174 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || |||||||| || || ||||| ||||| | Sbjct 76599 ATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACTATCACCCTCGAGGTGGAGTCTTCT 76540 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | || | ||||| ||||||||||| |||||||| Sbjct 76539 GACACCATCGACAACGTTAAGGCAAAAATTCAGGATAAGGAGGG 76496 >seq14 Length=427353 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGA---ATCGTGGGTCGTCGTTTGGTCAGCGTCTC 64722 |||||||| ||||| || |||||| ||| | || | |||||| |||| | Sbjct 81861 AAGGCTGACTGGGCACTCAAGTGGATATCTGATCAGCGTTCCACATTTGGTGAGCGCTTG 81802 Query 64723 GCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGG 64782 | || || || || ||||| || ||||| ||||| || || ||||| |||||| Sbjct 81801 GTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCCTTTGCGTCTATCTTCTGG 81742 Query 64783 CTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGAC 64842 | || ||||| || |||||||| || || |||| || |||||||| ||| || || Sbjct 81741 TTGAAGAAGCGTGGTCTGATGCCTGGACTTACGTTCTCCAACGAGCTCATCAGCCGTGAT 81682 Query 64843 GAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAG 64890 ||||| | ||| || ||||| || | || || |||||||||||| Sbjct 81681 GAGGGTATGCACACCGATTTTGC--TTGCTTGCTCTTTAGCCACCTCAAG 81634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570299350236000