Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq16 102 5e-17 seq47 96.9 2e-15 >seq16 Length=421267 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||||||||| ||||| || || || |||||| || ||||| ||||| || Sbjct 331994 GCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGA 332053 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || ||||||| | || || || ||||| || | || || || || || || Sbjct 332054 AAGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGG 332113 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCA 34657 | || ||||||||| ||| ||| | || ||| | || ||||| |||| Sbjct 332114 AATGCCTTCCTTGTCTTGGAT-TTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCA 332172 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||| || || || ||||| || | || || ||||||||||||||| Sbjct 332173 CTTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATG 332222 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| ||||| || |||||||| ||||| || ||||||| | || || |||||||| Sbjct 332259 TCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAG 332318 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | || |||||||| || || | || |||||||| |||||| | ||| ||| | Sbjct 332319 ATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTT-GCTTTCACGTT 332377 Query 34636 AAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 || || || | ||| ||||||| || || || || || || | || || || Sbjct 332378 GTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAAC 332437 Query 34695 AAAAATCTGCATG 34707 |||||||||||| Sbjct 332438 GAAAATCTGCATG 332450 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | || | || || |||||||||||||| ||||||||||| || Sbjct 331766 GCCACCACGAAGACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGA 331825 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| | || || || || || || | || |||||||| || || Sbjct 331826 GAGCGTACGACCATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGG 331885 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || |||||||| ||| |||| || || | || ||||| ||||| Sbjct 331886 AATGCCTTCCTTGTC-CTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCA 331944 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| || || || || || || | || || ||||||||||||||| Sbjct 331945 CCTCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCATG 331994 >seq47 Length=240645 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | |||||| | || | ||||| ||| |||||| || ||||| || || || Sbjct 27984 GCCGCCACGAAGACGGAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGA 27925 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || ||||||| || || || || || || || | || ||||| || || || Sbjct 27924 AAGAGTACGTCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGG 27865 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| |||| || ||| | || ||||| ||||| Sbjct 27864 AATGCCCTCCTTGTCCTGGATC-TTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCA 27806 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||| || ||||| || || || | || || || || ||||||||| Sbjct 27805 CTTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 27756 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | || || ||||||||||| || || || ||||| || Sbjct 28439 CCACCACGAAGACGGAGTACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAC 28380 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| |||| || | || || |||||||| || | |||||| ||||| || || Sbjct 28379 AGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGA 28320 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| ||||| ||| || | || ||| | || |||||| |||||| Sbjct 28319 ATGCCCTCTTTGTC-CTGAATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCAC 28261 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || ||||| || | || || || || |||||||| Sbjct 28260 CTCCAATGTGATTGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723654561150