Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq16 215 1e-50 seq47 203 8e-47 seq34 113 1e-19 seq101 93.3 1e-13 seq39 91.5 3e-13 seq35 87.8 4e-12 >seq16 Length=421267 Score = 215 bits (238), Expect = 1e-50 Identities = 181/222 (82%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||||||||| ||| ||| ||||||||||||||||| | || || Sbjct 331772 ACGAAGACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGT 331831 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| |||||| ||||||||||| |||||||||||||||||||||| || Sbjct 331832 ACGACCATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCC 331891 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||| |||||| ||||| || ||||| ||||| || || ||||| | Sbjct 331892 TTCCTTGTCCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAA 331951 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| ||||| |||||||| ||||| ||||| | |||||| Sbjct 331952 AGTGATGGTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCAT 331993 Score = 185 bits (204), Expect = 2e-41 Identities = 176/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||| || |||||||| ||||| || || || || || ||||| | || Sbjct 332225 TCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAGAG 332284 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | || ||||||| |||||| || || ||||| |||||||||||||||||||||| Sbjct 332285 TGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAAT 332344 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||||||||| |||||| ||||||||| |||||||| || ||| || || || Sbjct 332345 GCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACTTC 332404 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| |||||||| ||||| || || | |||||| Sbjct 332405 CAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 Score = 183 bits (202), Expect = 7e-41 Identities = 173/221 (78%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | | ||| | |||||| || ||||| || |||||||| ||||||| ||| || Sbjct 332001 CGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTG 332060 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||||| |||||| || || |||||||||||||| || ||||| |||| ||| Sbjct 332061 CGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCT 332120 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| ||||| || |||||||| ||||||||||| || ||| || || | Sbjct 332121 TCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCACTTCCAAC 332180 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| |||||||| ||||| ||||| | |||||| Sbjct 332181 GTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCAT 332221 >seq47 Length=240645 Score = 203 bits (224), Expect = 8e-47 Identities = 178/222 (80%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| || |||||||| || |||||||| || || | ||| || Sbjct 27978 ACGAAGACGGAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 27919 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||| ||||| ||||||||||| |||||||| || |||||||| ||||| |||| || Sbjct 27918 ACGTCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCC 27859 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| |||||||| |||||||||||||| || || || | Sbjct 27858 CTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAA 27799 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| |||||||| ||||| || || | |||||| Sbjct 27798 CGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27757 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| || || ||||| || || ||||| || || | |||||| Sbjct 28206 ACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGT 28147 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||||||||||||||||||||| || ||||| || || || ||||| | || Sbjct 28146 GCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACC 28087 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || ||||| ||||| || ||||| |||||||| || ||||| | Sbjct 28086 CTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCCAA 28027 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| |||||||| ||||| || || | |||||| Sbjct 28026 CGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27985 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||||||||| ||| ||| || ||||| || ||||||| || || Sbjct 28434 ACGAAGACGGAGTACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGT 28375 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || |||| |||||| || || ||||| || || || ||||| || |||| || Sbjct 28374 GCGCCCGTCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCC 28315 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || |||||||| ||||| || ||||| ||||||||||| || || ||||| | Sbjct 28314 CTCTTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAA 28255 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| |||||||| ||||| || || | |||||| Sbjct 28254 TGTGATTGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 >seq34 Length=318726 Score = 113 bits (124), Expect = 1e-19 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034 || |||||||| ||||| |||||||||||||||| ||||||||||||||||||||| Sbjct 239215 CCAGCGAAGATGAGGCGCTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCC 239156 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 |||||||| ||||||||||| || ||| ||||| | |||| ||||| Sbjct 239155 TTCACGTTGTCGATGGTGTCCGATGATTCCACCTCCAACGTGAGGGTCTT 239106 >seq101 Length=139910 Score = 93.3 bits (102), Expect = 1e-13 Identities = 163/236 (69%), Gaps = 15/236 (6%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || | || || || || ||||| || |||||||| || || | ||| || Sbjct 112920 ACGAAGCCAGAGAAAGAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 112861 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACT-- 211010 | || ||||| | ||||||||| || ||||| | || ||||||||||| | ||| Sbjct 112860 ACGACCGTCTTCGAACTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCAGGGGAGACTCT 112801 Query 211011 ------CCTTCCTTGTCCTGGATCTT----TTG--TTTCACGTTTTCGATGGTGTCAGAG 211058 | ||| | |||||| |||| ||| || |||| |||||| |||| || Sbjct 112800 CGGATGCGTTCGTCGTCCTGAGTCTTCGCCTTGACGTTGTCGTTGTCGATGATGTCGGAA 112741 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || | || || ||| ||||||| |||||||| ||||| || || | |||||| Sbjct 112740 GGCTCCA-CTTGAATGTGCTCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 112686 >seq39 Length=270505 Score = 91.5 bits (100), Expect = 3e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||| || ||||| ||||| || || || |||| ||| | | ||||||| ||| Sbjct 5971 TGAATCGTCGACTCCTTTTGAATATTGTAGTCCGAAAGCTTGCGGTCATCTTCAAGCGTG 5912 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||||| || ||||| ||||| || |||| |||||||||||| || |||||| Sbjct 5911 TTTCCAGCGAAGACGAGCCGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGAATCTTT 5852 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || | | | || || ||||| || || | || ||||||||||| Sbjct 5851 GATTTGACACTGTGTACGGAATCGTCACTTTCTGCCCAGACAACTATGGTCTTTCCCGTA 5792 Query 211092 AGAGTCTTTACAA 211104 || ||||| |||| Sbjct 5791 AGGGTCTTCACAA 5779 >seq35 Length=287174 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||| || |||||||| || || || || | |||||| Sbjct 76339 AGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGTGTGCGACCATCT 76398 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 || |||||||| || || ||||| || || |||||||| || |||| Sbjct 76399 TCGAGCTGCTTTCCAGCAAAGATGAGACGCTGTTGGTCGGGGGGAA 76444 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||| ||||| || ||| || ||||| |||||||||||||| || |||||| Sbjct 76496 CCCTCCTTATCCTGAATTTTTGCCTTAACGTTGTCGATGGTGTCAGAAGACTCCACCTCG 76555 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| || ||||| ||||| || || | |||||| || Sbjct 76556 AGGGTGATAGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCATCTT 76602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159128979965750