Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq47 185 2e-41 seq16 145 2e-29 seq34 111 4e-19 seq35 98.7 2e-15 >seq47 Length=240645 Score = 185 bits (204), Expect = 2e-41 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||||||||| ||||| || || |||| ||||| |||| | ||| Sbjct 27978 ACGAAGACGGAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 27919 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| ||||||||||| ||||||||||| || || ||||| || Sbjct 27918 ACGTCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCC 27859 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| ||||||||| |||||| ||||||||||| || | ||||| || || Sbjct 27858 CTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAA 27799 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||||||| | || || | ||| | ||||| Sbjct 27798 CGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27757 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||||||||| || || || || || | ||||| |||| | || Sbjct 28206 ACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGT 28147 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| || ||||| || || || || || ||||| || ||||| Sbjct 28146 GCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACC 28087 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| ||||||| ||||| ||||| || | ||||| || || Sbjct 28086 CTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCCAA 28027 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||||||| | || || | ||| | ||||| Sbjct 28026 CGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27985 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| || ||| || || |||| ||||||||| | || || Sbjct 28434 ACGAAGACGGAGTACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGT 28375 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| || || | |||||| || || ||||| || || || ||||| || ||||| || Sbjct 28374 GCGCCCGTCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCC 28315 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||| || ||||| ||| || |||||||||||||| | ||||| || || Sbjct 28314 CTCTTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAA 28255 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| ||||| | || || | ||| | ||||| Sbjct 28254 TGTGATTGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 >seq16 Length=421267 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| || ||| || ||||||| || ||||| | | || Sbjct 331772 ACGAAGACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGT 331831 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || |||||||| || ||||||||||| || ||||| || Sbjct 331832 ACGACCATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCC 331891 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || |||||| ||||||| ||||| ||||| || | ||||| || || Sbjct 331892 TTCCTTGTCCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAA 331951 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| ||||| Sbjct 331952 AGTGATGGTCTTCCCCGT 331969 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || ||| | ||| || || || || || |||| |||||||| | | || Sbjct 332001 CGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTG 332060 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| | |||||| ||||| |||||||| ||||| || || || ||||| ||| Sbjct 332061 CGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCT 332120 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||||||||| || |||||| ||||||||||| || | |||||| || ||| Sbjct 332121 TCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCACTTCCAAC 332180 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||| ||||| ||||| Sbjct 332181 GTGATGGTCTTACCCGT 332197 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || |||||||| || || | ||||||||| | | || | || ||| Sbjct 332238 AGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCT 332297 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || || ||||| || ||||||||||| || ||||| ||||||||||| Sbjct 332298 TCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCC 332357 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||||| |||||||| || |||| || || || |||||||| ||| Sbjct 332358 TGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTC 332417 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | || || | ||| | ||||| Sbjct 332418 TTCCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 225504 GACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTC 225563 ||| ||||| || || ||||| || |||| |||||||| | | || | |||||||| Sbjct 332468 GACCAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGATAGCGTGCGGCCATCTTC 332527 Query 225564 TAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 |||||||| ||||||||||| || ||||| |||||||| ||||||| Sbjct 332528 AAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGAATAC 332574 >seq34 Length=318726 Score = 111 bits (122), Expect = 4e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||||||||| || || |||||||| || ||||| ||||||||||| ||||||||| | Sbjct 239215 CCAGCGAAGATGAGGCGCTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCC 239156 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 ||||| ||||||||||| || | |||||| || ||||||| |||||| Sbjct 239155 TTCACGTTGTCGATGGTGTCCGATGATTCCACCTCCAACGTGAGGGTCTTG 239105 >seq35 Length=287174 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||||||||| || || || |||| ||||| ||| | || | |||||| Sbjct 76339 AGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGTGTGCGACCATCT 76398 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || |||||||| ||||| ||||| || || ||||||||||| ||||||| Sbjct 76399 TCGAGCTGCTTTCCAGCAAAGATGAGACGCTGTTGGTCGGGGGGAATAC 76447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192507517075700