Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq14 174 2e-38 seq1189 167 3e-36 seq78 87.8 3e-12 >seq14 Length=427353 Score = 174 bits (192), Expect = 2e-38 Identities = 380/568 (67%), Gaps = 6/568 (1%) Strand=Plus/Plus Query 46619 TAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAG 46678 |||| | || || |||||||| || | || ||||| | || || | ||||| | Sbjct 81645 TAAAGAGCAAGCAAGCAAAATCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGG 81704 Query 46679 AAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATC 46738 | || || || |||||||| || |||||||| || | ||| || |||| ||| || || | Sbjct 81705 AGAACGTAAGTCCAGGCATCAGACCACGCTTCTTCAACCAGAAGATAGACGCAAAGGAAC 81764 Query 46739 CAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCAT 46798 |||| ||||| |||||||| || || ||||| ||||| | | ||| || | ||| | Sbjct 81765 CAGAGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCAAATGTGGAAC 81824 Query 46799 CATTATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTT 46855 | || | |||||| | | ||||| |||||||| ||| || ||||| || |||| Sbjct 81825 GCTGATCAGATATCCACTTGAGTGCCCAGTCAGCCTTGCGCTTGACGCAAGGAATAGTTT 81884 Query 46856 CTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAA 46915 | || || | |||||| | | | | ||| || | || || || || | || Sbjct 81885 CCATGGCGTCAAAGAGGTATTCGCGCTGGGCGGAATCCTTGATGTAAGTGTCGATGAGAA 81944 Query 46916 GACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTG 46975 | || | || || |||||||| || || || || || ||||| || || | | Sbjct 81945 GCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCACCGGG 82004 Query 46976 CTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCAT 47035 |||||| | ||| ||||| | | || |||||| | || ||||| || || |||| Sbjct 82005 CTTCAGCAGCCTGGACCTCATTGGAGAAACGTTCAAGGAGGTTTTCATTGACAATGCCAT 82064 Query 47036 CACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT- 47094 | ||||| || || || | || ||| || ||||| ||| | | | | || Sbjct 82065 CGGATGCAGCGAAGAAGGCGAGGACGTGTGAAACAAAATGGCGTTCGTTGTCATTAAGAC 82124 Query 47095 --TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACG 47152 || ||||||||| || |||||||| | ||| | || ||||| ||||||||||| | Sbjct 82125 GGTTCGTCCAGTCATGGACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCAGAATGATG 82184 Query 47153 CCTCTGCTTTTTTATACATATTCCATAT 47180 | || ||||| || ||||| | |||||| Sbjct 82185 CTTCGGCTTTCTTGTACATTTGCCATAT 82212 Score = 165 bits (182), Expect = 1e-35 Identities = 359/536 (67%), Gaps = 6/536 (1%) Strand=Plus/Minus Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 || || || | ||| || | ||| || || || |||||||| ||||||| |||||||||| Sbjct 84069 CCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAGCCCCGGCATTAATCCACGCTTT 84010 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 |||||||| ||||| | || || || || ||||||||||| || || || || || || Sbjct 84009 TTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAATATACCCTCGACTGCAGCAAAG 83950 Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCTTTGAGCCCAATCA 46827 || || || | | | | || || || | | ||||| | | ||||| || Sbjct 83949 GCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGATATCCATCGTAACGCCCAGTCT 83890 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCA 46887 || ||| ||| || || || || ||||| |||| ||| ||| | | |||| Sbjct 83889 GCTTTTCGCTTGACGGCCGGTATGGTCTCTATGGCATCAAACAGATACTGGCGCTCATTG 83830 Query 46888 CTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATA 46947 || || || ||| || || | || ||| | |||| ||| | |||||||| Sbjct 83829 ACGTCCTTGACGAGTGTGTCGATAAGGAGCGAATAGGTCTCTGCATGGACATTTTCAATC 83770 Query 46948 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGT 47007 ||||| || || ||||| |||| ||||| | ||||| || || | |||| || Sbjct 83769 ATGATCTGGAAACCATAAAAGCATCGAGCTTCTGGGATCTGGACTTCGTTGGAAAAACGC 83710 Query 47008 TCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTA 47067 ||| || ||| || || ||||| |||||| ||||||||||| || || | |||| Sbjct 83709 TCAACCAGATTTTCGTTAACTATGCCATCAGACGCAGCAAAAAAAGCTAAAATATGTGAG 83650 Query 47068 ATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATA 47124 || || | ||||| | ||| ||| ||||||||| || ||| | || | | Sbjct 83649 ATGAAGTGGCGTTCATTTGCAGTTAGTCGGGTATTCCAGTGCACAATGTCTGTCGAGAGA 83590 Query 47125 TCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 || | |||||| || ||||| || || ||||| ||||| || |||| ||||| || Sbjct 83589 TCCATTTCTTCGGCAGTCCAAAAAGATGCCTCCGCTTTCTTGTACAAGTTCCAGAT 83534 >seq1189 Length=1840 Score = 167 bits (184), Expect = 3e-36 Identities = 388/582 (67%), Gaps = 11/582 (2%) Strand=Plus/Minus Query 46615 TGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCG 46674 || ||||| | || || |||||||| || | |||||||| | || || | ||| Sbjct 1810 TGGTTAAAGAGCAAGCAAGCAAAATCGATGTGCATACCTTCATCACGGCTGATGAGCTCG 1751 Query 46675 TTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAA 46734 || || || || || |||||||| || |||||||| || ||||| || || | ||| | | Sbjct 1750 TTGGAGAACGTAAGTCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCAAGA 1691 Query 46735 GATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTG 46794 || ||||| ||||| |||||||| || || ||||| ||||| | | ||| ||| | || Sbjct 1690 GAACCAGAGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCGAAGGTG 1631 Query 46795 GCATCATTATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATT 46851 | | | || | | |||| | | ||||| |||||||| ||| || ||||| || Sbjct 1630 GAACGCTGATCAGATACCCACTTGAGTGCCCAGTCAGCCTTGCGCTTGACGCAAGGAATA 1571 Query 46852 GTTTCTATAGCATTAAAGAGAAAGtttttttCATCACT--ATCTTTAACATATGTATCTA 46909 ||||| || || | |||||| || || | | ||| || | || || || | Sbjct 1570 GTTTCCATGGCGTCAAAGAG---GTATTCGCGCTGGCGGAATCCTTGATGTAAGTGTCGA 1514 Query 46910 TTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAAC 46969 | | ||| | | || || |||||||| || || || || || ||||| || | Sbjct 1513 TGAGAAGTGAGTTGGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCGTAGAAGC 1454 Query 46970 ATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTA 47029 | | ||||||| | ||| ||||| | | || || ||| | || ||||| || | Sbjct 1453 ACCGGGCTTCAGCAGCCTGGACCTCATTGAAGAAACGCTCAAGGAGGTTTTCATTTACAA 1394 Query 47030 TTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAG 47089 | ||||| ||||| || || || | || ||| || ||||| ||| | | | Sbjct 1393 TGCCATCGGATGCAGCGAAGAAGGCGAGGACGTGTGAAACAAAATGGCGTTCGTTGTCAT 1334 Query 47090 TCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGA 47146 | || || ||||||||| ||| |||||||| | || | || ||||| ||||||| Sbjct 1333 TAAGACGGTTCGTCCAGTCATGGATGTCTTTTGAGAGCTCCATCTCCTCAGCAGTCCAGA 1274 Query 47147 ATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGAT 47188 |||| || || ||||| | ||||| | |||||| | | ||| Sbjct 1273 ATGATGCTTCGGCTTTCTCGTACATTTGCCATATCTGATGAT 1232 >seq78 Length=184271 Score = 87.8 bits (96), Expect = 3e-12 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCC 76741 || || ||||| || | || |||| ||||||||||| || || ||||| | | | ||| Sbjct 133890 AGGTCGAGGAAATCAAATATGTCAGGGTGCCATGGTTCAAGGTAAATCGCAAAAGCTCCC 133949 Query 76742 GGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATT 76801 ||||| || || || || ||||| | ||| | || ||| || ||| | | | ||| Sbjct 133950 GGTCGCTTGTTGCCACCTTGATCGACATAGCGTGCTGTGGCATCATACGCACGAAGCATG 134009 Query 76802 GGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATA 76842 |||| ||| |||||||| ||| || |||||||||| ||| || Sbjct 134010 GGAACAATACCGTTAGA-GTAGCCGTTTGTTCCAGCAATGTA 134050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712920586896000